Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3325g00001 ATGGAAAAGTGTGAAAATCTCGCTAAAAGTGTTGTTGAGACACAATCTCCAGGATCATCTACTGTTTTGGTTGCACGTTTTGATGGTCAGATAACAACTATTGAAGACATTGACATGAGTGAGAGTTTAATATATTGTGATAAGGTTGTTGATTTGGAGAAAGACAATGATGATTTTGGAGAATATAATCAGTGTGAAACTATAGAAGACGAAGATGGTGATTGTAGGGAAGATAACGTGCATGAAATTGTGGGAGCTGATGATATGAGCTTCACGCCATTTAGGTGGAATTATGTATGTGCAAAGCAAGGTGTGAAACGACTTCATGATAAAAGAGTTGATGTTGACAATGTCAAAAGGCGAAGGGAAACAAGGACTGATTGTTCAGCGATATTACAAATAAAGTTGGTTGATGGATCATGGGTTGTGGAAAAATTCAATGATACACACAACCATCCATTGATTAACACTCCTACAAAGGTGAAGAAGTTTTTTTCTCATAATGATTTACGACGCTCAGGCATTACTAAGTCGTTGGTTTCTAAGCTTTATCAGGAGGGTTTAACATCTTCAAAAATCTCAAAGGTGGTTAACGCTATGAACGAAGATGTTAATATTACTCCAATTCAAATTAGCACTATTATATCAAGCCAGAGACATAGTAATGTAGGCCGAGAATGCCAGGGCATTGTCAAACACTTTCAAAGGAAGTCTGTTGTTGATAGAGATTTTTATTTTGATATATATCTAGCGGAAGATGGTACATTAAGAAGTGTATTCTGGGCGGATGGTAGGTCAAGAGCTGCATATGCCCAATTTGGTGAAGTCCTTGTGTTTGATGTGACATACAGAACAAACAAGTTCAAGTTTTCTTTTGCCCCTTTCGTGGGTGTTAATCACCATGGGCAATCAATTTTATTTGCTGCTGCCTTGTTAGAAGATGAAACAGAAGCAACCTTTACTTGGTTGTTTGAACAATTTCGAACATGTATGTTTGATAGGTCTCCGGTTGCTATTATAACTGATCAAGACAAAGCTATGGGAAAATCAATTGCTAAGATATTTCCAGGAGCTCGACATCGTTTTTGTGCATGGCACCTGAAAAAACATGTTATGGAGCATAGTCAAGCACTTCGCGCACAATTTAAAGATAGTTTTGATGTTGACTTCCGTGAGTGGTATAAAAGTCAAAACATCGATGAGTTTGAAGGCAAGTGGGAAGCATTAAAGAATAAATATGATATTAGAGCAGGTAGTTGGTTGGCTAACATGTATACTTCACGTCATCATTGGGCAAAGGCATACTTGAAAGATACATTTTTTGCCGGAATGACCACAAGTGGTCGAAGTGAGAGCATCAATTCTTTTTTTGATGGATATGTCAACTCTAACACAATGTTAAATGACTTTGTCATCCAATACGACAAAGCAATCAAGTCTAGGAGGGATGCAGAAGAAGATGAAGATTTCAAAACAATAAATACGAAGGCAATTTTGGAGACTGCTCACCCAATCGAAGCAACAGCCGGAGAGCGCTACACAAGAAAAATGTTTGAGATCTTCAAAAAGGAGTGGAAGGTTGCCATTGGTGATTATTTTCATGAAAAGATTTCAACAGACAATAAATGTACCAAGTACCGGGTGGGATCTCGTGAAGTTGATAAAAAGTGGTGGGCAATTGTCGACTACCATTTGGAAGAAACATTCACAGCTCATTGTTCTTGTGCAAAATTTGAAACTATGGGGATTTTGTGTAGACATACTCTATACATCATGAAGAAGAAACAAATAATGACCCTTCCTGAAAAATATATTTTGTCTAGGTGGACAATGGATGCAAGTTATAGGGTTGGAGAATTTGCAGGCATTCATGTTGAAACAACTACTAATGAAGTTAGTGCATTGTCTTTGTGGTTGGTTCAATCTAAATTCACTATGGCTGTTTCTGAAGCAAGAGATTCTATTTCTGAGGTTAGAAGGCTTGATGCTATGATTTCTGAATTTCTACAACTACAATTGGAAAGAAAGAAAAAGGCATCTGAAGATGAAATGGTTCCCACAATTTATCCTTCACTAGTTCCCGATAATGTTACACAAGTTTCACACATTAATGATGTGCGTGATCCTACTCAACTAGTCAAAACTAAGGGGCGTCCAAGGGTTGCTTCACGTATAAAATCTAGCATGGAAATGTCCACAAAACAACAAAGGACTTGCAGTTATTGTCAAGGAAAAGGTCATTATAAGACTGGTTGTCAGAAGCTAAAGGTTACTATATCCCCAGAAGTGGCTTCGAGAACAGTAAACAGGTCCATTATAGCTGAACTTGTGAGGCTGTATAAAGAGTCTGACTTGGGGACGAGACTTCCAGCATATGATGGCAGAAAAAGTCTTTACACTGGGGTAGAGGCAAAGTATAAGAAAAAGTAG 2430 0.3782 MEKCENLAKSVVETQSPGSSTVLVARFDGQITTIEDIDMSESLIYCDKVVDLEKDNDDFGEYNQCETIEDEDGDCREDNVHEIVGADDMSFTPFRWNYVCAKQGVKRLHDKRVDVDNVKRRRETRTDCSAILQIKLVDGSWVVEKFNDTHNHPLINTPTKVKKFFSHNDLRRSGITKSLVSKLYQEGLTSSKISKVVNAMNEDVNITPIQISTIISSQRHSNVGRECQGIVKHFQRKSVVDRDFYFDIYLAEDGTLRSVFWADGRSRAAYAQFGEVLVFDVTYRTNKFKFSFAPFVGVNHHGQSILFAAALLEDETEATFTWLFEQFRTCMFDRSPVAIITDQDKAMGKSIAKIFPGARHRFCAWHLKKHVMEHSQALRAQFKDSFDVDFREWYKSQNIDEFEGKWEALKNKYDIRAGSWLANMYTSRHHWAKAYLKDTFFAGMTTSGRSESINSFFDGYVNSNTMLNDFVIQYDKAIKSRRDAEEDEDFKTINTKAILETAHPIEATAGERYTRKMFEIFKKEWKVAIGDYFHEKISTDNKCTKYRVGSREVDKKWWAIVDYHLEETFTAHCSCAKFETMGILCRHTLYIMKKKQIMTLPEKYILSRWTMDASYRVGEFAGIHVETTTNEVSALSLWLVQSKFTMAVSEARDSISEVRRLDAMISEFLQLQLERKKKASEDEMVPTIYPSLVPDNVTQVSHINDVRDPTQLVKTKGRPRVASRIKSSMEMSTKQQRTCSYCQGKGHYKTGCQKLKVTISPEVASRTVNRSIIAELVRLYKESDLGTRLPAYDGRKSLYTGVEAKYKKK 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3325g00001 809 Pfam FAR1 DNA-binding domain 95 155 IPR004330 -
Gabi3325g00001 809 ProSiteProfiles Zinc finger SWIM-type profile. 563 596 IPR007527 GO:0008270
Gabi3325g00001 809 Pfam MULE transposase domain 276 369 IPR018289 -
Gabi3325g00001 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 96 642 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3325g00001 Gabi-Chr3325 10669 14259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3325g00001 757 806 Eukaryotic Initiation Factors Gene Family AT5G43810 78.000 4.49e-17 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3325g00001 MULE 7.1e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3325g00001 - - lsv:128127215 698.353