Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3324g00002 ATGAAGGCTGATTGCCTTAAATTATATAAAAGGGAGAAAGATAGATTATTGGATATGTTAAAGGATAATTCAAGTAGAGTTTGTTTGACATCTGATTTGTGGACTTCTCTAACCACTGATGGATATATATGTTTGACTGTACATTTTGTTGACAAGAATTGGCATCTGCAAAAAAGAGTTCTGAATTTTGGTTTTATGCCACCTCCCCATAATGGAATCTCATTGGCTGAAAAAATTCACATGTTTTTGAAGGATTGGGGTTTAGAAACGAAGGTTTTTTCAATTACATTGGATAATGCTTCTGCAAATGATGTTTGTGTTCAGTTTTTGAGAGACCAATTATTGGTAGGAGGAGGACTTCTAGGTTATGGTGAGTTCTTTCACTTGAGATGTTGTGCTCATGTATTAAATTTGATAGTTCAGGAAGGATTGAAAGAAGTTGATGAATCTATGGTAAAAGTCAGAGAAAGTATCAAATATGTGAAGGGATCACAAGCAAGGAAACAAAAGTTTTTGGATTGTGTTGGTCATAGTTCTCTTGGGTCTAAAAGAGGTTTGAGGCAAGATGTCCCAACTAGGTGGATTTCTACATTTCTCATGCTTGATAATGCACTTTTTTATAAACGTGCCTTTATGCATCTTGAGCTAAGTGATTCCAATTACAAACATTGTCCATCTAGAGATGAATGGGATAGAATTGAAAAGATCAATAGTTTCTTGTCTGTTTTTTATGATATCACTTGTGTCTTCTCTGGAACCAAGTATCCAACCGCAAACCTCTACTTTCCTTACGTTTTTACAGCACATTTGACATTACAAGATGGATTGAAGAGTGATGATGCCTATATTGTGAATATGGCAGGAAAGTTGTTTACTAAATTTGAGAAATATTGGCATGACTTTAGCTTGATTTTAGCTATAGCTGTTATTTTGGATCCGAGATATAAGCTGAGTTTTGTTGAATCGTGTTATAATAAATTGTATGGTGCTGATGGGAAAAATGAATTAACAAAGGTCAAGAACAAGCTGAATTCTTTGTTTTGTGAGTATGCAATTGATGGAATCAGAAACTATTCAACAAGTTCTTCATCAACCAAGGTTGGAGATGGTGGGACAACACATCAAACCTCATTTTCTAACATATCTAACAATGTTTTGAGTGAATTCGATAATTTTAATGAAGTGATTGTGCCCCAAAAGTCACAGCTTGAATTATATTTAGAGGATCAAAGGTTTGACAGAAAAGCTGAGTTAAATGTATTAAAATATTGGGAGGCTAACCAATTTAGGTATCCGGAGATTGCTGCAATGGCGAGAGATATATTTGCGATACCTATTTCTAGTGTTGCTTCTGAAAGTGCTTTTAGTGTTGGGGGAAGAGTGCTTGATCAATACAGAAGTGCACTCAAACCTGATACAATGGAAGCTTTAGTTTGCACTAGAGATTGGCTGTATGGAGAGCAAAAGCATCCAACTGTAGCTTTTGAAGAATTATTAAAAGATGTCATGGAAGAAATTTCTATTCAACAGTCAGCATTTGACCATGCTTCTCAAAGTATTTTCTCAACTAGGATGGAAAAGAAAGCACTTGTTAAATCCTTGGCTATAATGGAAGCACTCGTTGATTTTGAATTTTTGGCAGCACCTTTGATGGAGTGGGCTGTTGAAGCTACTAAGAATGTTGAGCTAGGTAACAAAGAACTCTCACAAGCCATTAAGAAGAATAGCAGCGCAGGAGGTTCCTTTTACTATTTTTGTTTGTGCTTACTTTTTCGATCCTCTTTCTTGATTGGTACAGTTAAATGGCGTTGGAAAGCATCTTTTTCTAGATGCGATAACAGTAATATTTACTCGAGAGGGACAAATGTGGATATATCAAATGATTTGACTAATCAGTTTATGAAGGGAATGATACAAGAGACTTGGAGATGTTAA 1935 0.354 MKADCLKLYKREKDRLLDMLKDNSSRVCLTSDLWTSLTTDGYICLTVHFVDKNWHLQKRVLNFGFMPPPHNGISLAEKIHMFLKDWGLETKVFSITLDNASANDVCVQFLRDQLLVGGGLLGYGEFFHLRCCAHVLNLIVQEGLKEVDESMVKVRESIKYVKGSQARKQKFLDCVGHSSLGSKRGLRQDVPTRWISTFLMLDNALFYKRAFMHLELSDSNYKHCPSRDEWDRIEKINSFLSVFYDITCVFSGTKYPTANLYFPYVFTAHLTLQDGLKSDDAYIVNMAGKLFTKFEKYWHDFSLILAIAVILDPRYKLSFVESCYNKLYGADGKNELTKVKNKLNSLFCEYAIDGIRNYSTSSSSTKVGDGGTTHQTSFSNISNNVLSEFDNFNEVIVPQKSQLELYLEDQRFDRKAELNVLKYWEANQFRYPEIAAMARDIFAIPISSVASESAFSVGGRVLDQYRSALKPDTMEALVCTRDWLYGEQKHPTVAFEELLKDVMEEISIQQSAFDHASQSIFSTRMEKKALVKSLAIMEALVDFEFLAAPLMEWAVEATKNVELGNKELSQAIKKNSSAGGSFYYFCLCLLFRSSFLIGTVKWRWKASFSRCDNSNIYSRGTNVDISNDLTNQFMKGMIQETWRC 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3324g00002 644 PANTHER BED FINGER-RELATED 4 488 IPR045259 -
Gabi3324g00002 644 Pfam hAT family C-terminal dimerisation region 403 484 IPR008906 GO:0046983
Gabi3324g00002 644 Pfam Domain of unknown function (DUF4413) 251 350 IPR025525 GO:0003677
Gabi3324g00002 644 SUPERFAMILY Ribonuclease H-like 19 484 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3324g00002 Gabi-Chr3324 18487 25228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3324g00002 550 578 SNARE and Associated Proteins AT1G51740 79.310 1.63e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3324g00002 - - qlo:115981290 618.616