Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3321g00032 ATGGGTAGTTGGGGTAGGGAAGGTGTAGTGAGACAGTATATAAGATCGAAGGTTCCTCGTTTAAGATGGACACCTGAACTGCATCGTTGCTTTGTTTATGCCATTGACACTCTTGGAGGTCATCACAAGGCTACTCCTAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTAACAATTTCACACGTCAAGAGCCATCTGCAGATGTACAGAAGCATGAGAGGTGACTCTTGCAGAAAAGATAGGACTGCAACCCCAAATAGAAAACAATCTTTTCAAGAGCATGATGATGGTTGTGTTGATGAAGTGAATGATGTTGGTGTTCACTCTTGTTTAAAACCCATTGGAAAAGCATCTGATTCCCTCTTCAGCTACAGCAATATCTCCCCAAAAAGAGCTAGAATCGAAAAGACACGTTCCCTCTCAGGAATCCTACAATGCAGCCAAAGAATATGTAAAGCAGTCCCAAAACCTTGCCCCATTTATGATTATCTGCAGAGCATGGCTGAGCAGAAGGGAATAAAGGAGATTTGTGCTGGTACAATATGGCAGACCCAACCCCATTTTTCCACAACCTTTCCTATGCTGCCTAAGCAACAATCTGATTTGCTCCAGGTACCCATCCCATACACTGTTGCCAAATTAACTGGTAAGGAGCCTTTTAATGAACTTGGGAACACTAGGAGGGTGCGTGCAGAAGATGAAGATATAGGAGGTTGTGAGTTGTCATTGTCAATCTCATTGCCCCATCCTTCGTCTCAGATCAGAAGCAATGCTGCTTCAGCCAGTGAGATCAGTGAAGGAATTTCATCACGCACCGGCTTAAGCAATTACTTGGGCTGCTCTAGTTCTTCAAATGTCCAAAACGGAATTAACTTAGACCTATCTTTGGCCATATGTGGCAATTGA 909 0.4345 MGSWGREGVVRQYIRSKVPRLRWTPELHRCFVYAIDTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDSCRKDRTATPNRKQSFQEHDDGCVDEVNDVGVHSCLKPIGKASDSLFSYSNISPKRARIEKTRSLSGILQCSQRICKAVPKPCPIYDYLQSMAEQKGIKEICAGTIWQTQPHFSTTFPMLPKQQSDLLQVPIPYTVAKLTGKEPFNELGNTRRVRAEDEDIGGCELSLSISLPHPSSQIRSNAASASEISEGISSRTGLSNYLGCSSSSNVQNGINLDLSLAICGN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3321g00032 302 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Gabi3321g00032 302 Gene3D - 18 74 - -
Gabi3321g00032 302 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 8 92 IPR046955 GO:0003700
Gabi3321g00032 302 FunFam Myb family transcription factor 17 75 - -
Gabi3321g00032 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Gabi3321g00032 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3321g00032 Gabi-Chr3321 410261 414802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3321g00032 1 74 G2-like Transcription Factor Family AT1G14600 72.152 8.65e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi3321g00032 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3321g00032 - - gmx:100810994 402.905