Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3321g00017 ATGGATTCTCAAATCCTTGACTTAAAAGCCCTTATACCCTTTTTCCTCTTCATGATTGTGGCACTGAAAATAGTGAGGAATCTCAAAAAAACTGACTCAACTCCAAAGGTACCCCCAGGGCCATGGAAACTACCAATCATAGGAAATATACCCCATCTTGTTACATCCACACCACACCGAAAATTAAGAGACTTGGCCAAAATATATGGACCCTTAATGCATTTACAACTTGGAGAGGTCTTCACAATTGTTGTTTCATCACCAGAGTATGCAAGGGAGGTAATGAAAACCAATGATGTTATTTTTGCATCAAGGCCTCAACTTTTATCAGCAAAAATAATTTCTTATGATTCCACAAATATAGCTTTTGCACCTTATGGAAATTATTGGAGACAGCTACGAAAAATTTGCACATTGGAGCTTTTGACCACAAAACGTGTCAATTCATTCCATCCCATAAGAGAAGAAGAGTTCACCAATGTCATCAAAAGGATTGCATCAGAGGAAGGATCACCCATCAATCTCACCAAAGAAGTACTTTTATCAATATATACAATCACTTCAAGGGCTGCTTTTGGCAAGAAATGCAAAGACCAAGAAGAATTCATATCACTGGCAAAAGAATTAGTAAAGGTTGCAGCAGGTTTTGGCATAGGAGATTTGTTTCCTTCTGCTAAATGGCCTCAACTTGTCTCTGGTTTGAAGCCTAAGCTTGAGAGGTTGCATCAACAAATTGATCAGATACTGGAAAACATCATCAATGAGCATAAAGAGGCAAAGTCAATAGCCAAACAAGGTCAAGTTGAAAAGGAGGAAGATCTTTTAGATGTTCTCCTAAAATTTCAGGATGGCAATGGTAGCAACCAGGATATTAGCTTAACTAATAACAATGTCAAGGCTATAATCCTGAATATTTTTGGTGCTGGAGGTGAGACATCAGCAACTACCATAGATTGGGCAATGGCAGAGATGGCAAGGGATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAGGTATTCACTATGAAAGGAAGGGTTGATGAAAGTTGCATCAATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACCCTGAGGCTACACCCTCCAGCTCCTCTTTTACTTCCACGAGAATGTGGACAAGCATGTGAGATTCATGGGTATCATATACCGGTCAAAAGTAAGGTCATTGTCAATGCTTGGGCAATTGGAAGAGATCCAAACTACTGGGCTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGTTCTATTGACTACAAAGGAAGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCGGGCAGCACATTTGGTTTGATAAATGTTGAGATGGCCCTTGCATTATTATTGTATCACTTTAATTGGAAGCTTCCCAATGGAATGAAAAGTCATCAGTTGGACATGACAGAGCAATTTGGAGTGACTGTTAGAAGAAAAGATGAGTTGTACTTGATTCCCTTGGCTCATACTCCTTAG 1521 0.3925 MDSQILDLKALIPFFLFMIVALKIVRNLKKTDSTPKVPPGPWKLPIIGNIPHLVTSTPHRKLRDLAKIYGPLMHLQLGEVFTIVVSSPEYAREVMKTNDVIFASRPQLLSAKIISYDSTNIAFAPYGNYWRQLRKICTLELLTTKRVNSFHPIREEEFTNVIKRIASEEGSPINLTKEVLLSIYTITSRAAFGKKCKDQEEFISLAKELVKVAAGFGIGDLFPSAKWPQLVSGLKPKLERLHQQIDQILENIINEHKEAKSIAKQGQVEKEEDLLDVLLKFQDGNGSNQDISLTNNNVKAIILNIFGAGGETSATTIDWAMAEMARDPRVMKKAQAEVREVFTMKGRVDESCINELKYLKSVVKETLRLHPPAPLLLPRECGQACEIHGYHIPVKSKVIVNAWAIGRDPNYWAEPERFYPERFIDSSIDYKGSNFEYIPFGAGRRICPGSTFGLINVEMALALLLYHFNWKLPNGMKSHQLDMTEQFGVTVRRKDELYLIPLAHTP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3321g00017 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 FunFam Cytochrome P450 71D8 30 501 - -
Gabi3321g00017 506 CDD CYP71-like 69 497 - -
Gabi3321g00017 506 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 Coils Coil 238 258 - -
Gabi3321g00017 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Gabi3321g00017 506 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PANTHER OS08G0105600 PROTEIN 61 505 - -
Gabi3321g00017 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00017 506 Gene3D Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3321g00017 Gabi-Chr3321 251424 253216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3321g00017 15 501 Cytochrome P450 AT3G26300 42.105 4.97e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3321g00017 - - gmx:102665189 802.357