Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3321g00016 AAAAAAAGAAGGCCAACCGAAAGTAGCATCAATGAACTCAAATATTTGAAATCAGTTGTCCAAGAGACCCTGAGGCTACACCCTCTAGTTCCTCTTTTACTTCCACGAGAATGTGGACAAGCATGTGAGATTCATGGGTATCATATACCCGTCAAAAGTAAGGTCAATGTCAATGCTTGGGCAATTGAAAGAGATCCAAACTACTGGACTGAACCAGAGAGGTTTTATCTAGAGAGATTCATGGATAGCTCCATTGACTACAAAGATAGTAATTTTGAATACATTCTGTTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACATTAGGTTTAATAAATGTTGAGATCGCCCTTGCATTGTTGTTGTATCACTTTGATTGGAAGCTTCCTAATGGAATGAAAAGTGAGGACTTGGACATGACTGAGCAATTTGGAGTGACTGTTAGAAGAAAAGATTACCTGCACTTGATACCCATTGTTTCTCATCCATTTCGGGTAGCATTGGATGAGGATGAAGAGGATGAAGATGGGGAGTATGTGGATAGCGAAGATGAGGGGGAACCTGAAAACAATAATGATGAAGCTTTAGATGCAGGGACTGCAGTATAG 609 0.4072 KKRRPTESSINELKYLKSVVQETLRLHPLVPLLLPRECGQACEIHGYHIPVKSKVNVNAWAIERDPNYWTEPERFYLERFMDSSIDYKDSNFEYILFGAGRRICPGSTLGLINVEIALALLLYHFDWKLPNGMKSEDLDMTEQFGVTVRRKDYLHLIPIVSHPFRVALDEDEEDEDGEYVDSEDEGEPENNNDEALDAGTAV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3321g00016 202 MobiDBLite consensus disorder prediction 169 202 - -
Gabi3321g00016 202 Gene3D Cytochrome P450 1 159 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 Pfam Cytochrome P450 2 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 SUPERFAMILY Cytochrome P450 2 156 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 PRINTS E-class P450 group I signature 104 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 PRINTS E-class P450 group I signature 94 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 PRINTS E-class P450 group I signature 17 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 PRINTS E-class P450 group I signature 58 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 97 106 IPR017972 GO:0005506|GO:0016705
Gabi3321g00016 202 PRINTS P450 superfamily signature 18 29 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 PRINTS P450 superfamily signature 95 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 PRINTS P450 superfamily signature 104 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3321g00016 202 MobiDBLite consensus disorder prediction 169 192 - -
Gabi3321g00016 202 PANTHER OS08G0105600 PROTEIN 2 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3321g00016 Gabi-Chr3321 235166 248308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3321g00016 7 162 Cytochrome P450 AT5G25130 53.205 3.78e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3321g00016 - - gmx:102665189 273.092