Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3321g00008 ATGGCATCTTTCATCTTCAAACTTGTTTTATCATCATTCCTTCTTTGTATTTTCTTTCAGGAACCTACCAATGCCCTTAAAAAGACCTACATTGTTTACTTGGGAGGGCATTCTCATGGTCCAGACCCTTCGCCTGATGATCTGGAAACAGCCACAAATTCCCATTATGATTTACTGGGTTCTGTCTTGGGAAGTCACGAGAAGGCCAAGGAAGCAATTATGTACTCATACAATAAGCACATCAATGGTTTTGCTGCCCTACTCGAAGAGAAAGAAGCTTCAGAGTTTGCAAAAAACCCAAACGTAGTTTCAGTATTCTTGAGCAGAGAGCATAAATTGCACACTACAAGGTCATGGGACTTTCTTGGACTGGAAAAAAATGGAAGAATACCTGCAAACTCTGCTTGGAGAAAGGCAAGATTCGGTGAAAATACAATCATCGCCAACATCGATACAGGCGTTTGGCCCGAACACCCGAGTTTCAGCGACAAAGGATACGGGCCTGTCCCATCGAAGTGGCGGGGTAAAGGGCTCTGTGAGATTGATCTCTTTAATGCTACAAAGAAAACGTTCTGCAACAGGAAGCTGATTGGAGCAAGAATCTTCAGCAAAAGTCACGAAGCAGAAGTCCGCAAACTGGACCCAATGGAACGCACTGCACGTGACTTTGTAGGCCACGGTACACACACTCTGTCAACTGCTGGTGGTAATTTTGCTAGAGGTGCAAATGTGTTTGGTAATGGTTACGGTACTGCTAAGGGAGGATCCCCAAGAGCTCGTGTTGTTGCCTACAAAGCATGTTGGAATAGAATGGATACAGGTGGGTGCCAGGGAGCAGACTTGCTAGCAGCATTTGATCAAGCCATATATGATAGAGTTGATGTCATATCTGCCTCTGTGAGTTGGAGTACTCCCCATGCTGAAGATTTGTTATCAGATGGTATTTCCATAGGTTCCTTCCATGCAGTTGCAAGAAATATTGTTGTTGTTTGCTCAGCTGGGAATGATGGTCCAGCACCCAGAACTGTCGCAAATGTGGCACCATGGTCCTTCACTGTTGCTGCTAGTACAATGGACAGGGATTTTCTCAGCAACATTTCTGTTGGAAACAAAAACTACATAAAGGGTGCCAGTCTTAATAGAGGCTTGCCACCAGCATCAAGAAAGTTCTATCCTTTGATAAGTGCTAATAATGCTGGACTTCCCAATGTGTCGATTAATGATGCTCGCCTTTGCAAGCCTGGAACACTTGATCCTACAAAAGTAAGGGGGAAAATACTAATCTGCCTTCGAAGTAATAAAATAACATCAGTTGGTGAGGGGCAGCAGGGTGCTCTTGCTGGCGCTGTGGCAGTGTTTGTGAAAAATGATAAGCAAAGTGGAAATACACTTTTAGCTGAGCCTCATATTTTACCTGCTGCAAGTATCAATGTACAGGATTATCAAGGTCAAGGAGGTTCCAACGGAAACAGCAAGCAGCTTCAGGCTTACTTGACTGCAGCAAAAACATATATAGGAATAAAACCAGCTCCAATTATGGCTGGATTCTCATCTAGGGGTCCCAGTGCCGTGCAACCATTGATACTCAAGCCTGACATAACTGCTCCTGGTGTTAACGTAATTGCCGCTTTTACACAAGGAGCAGGTCCCTCTAATCTAGCATCAGATGCACGTAGAGTTCTTTTCAATGCACAACAGGGAACTTCTATGTCTTGCCCTCATGTTGCTGGGGTTGCAGGTCTTCTCAAAACAATTCATCCTAATTGGAGTCCAGCAGCTATCAAATCAGCCATCATGACTACTGCTACAACGCTAGATAACACGAATCGGCCTATTAAGGATGCATTTGATCAGATAGCAACTCCATTCGAATACGGCGCAGGGCATATTCAGCCAAACCTCGCAATGGATCCTGGACTTGTTTATGATTTAAGCACAAATGATTACTTGGACTTCTTATGTGCATCTGGTTACAACCAAGCTTTACTCATGTTGTTTTCTAAGTTGAAAATCTCTCACACTTGTCCTAAGTCTTACAACATTGAAGATTTCAACTACCCTTCAATCACGGTAACTCATCGGGGGACAAACCTTATAAATGTTAGTCGTACAGTTACAAACGTTGGGCCTCCGAGTACATACGTTGTGAAAACTCACCTGCTTGAAGGATTTAAGGTTCTTGTTCAACCAAGTTCCTTGACTTTTAAGACAACTGGAGAAAAGAAGACCTTTCGGGTTATTATGCAGGCGAGGGGCGTGCCACGTCATGGTTTACCAATATTTGGGAACTTGTCGTGGACAGATGGCAAGCACAGAGTGACTAGTCCTATTGTGGTCCTTGCACGTCAGAAATTAGTCTGA 2361 0.4388 MASFIFKLVLSSFLLCIFFQEPTNALKKTYIVYLGGHSHGPDPSPDDLETATNSHYDLLGSVLGSHEKAKEAIMYSYNKHINGFAALLEEKEASEFAKNPNVVSVFLSREHKLHTTRSWDFLGLEKNGRIPANSAWRKARFGENTIIANIDTGVWPEHPSFSDKGYGPVPSKWRGKGLCEIDLFNATKKTFCNRKLIGARIFSKSHEAEVRKLDPMERTARDFVGHGTHTLSTAGGNFARGANVFGNGYGTAKGGSPRARVVAYKACWNRMDTGGCQGADLLAAFDQAIYDRVDVISASVSWSTPHAEDLLSDGISIGSFHAVARNIVVVCSAGNDGPAPRTVANVAPWSFTVAASTMDRDFLSNISVGNKNYIKGASLNRGLPPASRKFYPLISANNAGLPNVSINDARLCKPGTLDPTKVRGKILICLRSNKITSVGEGQQGALAGAVAVFVKNDKQSGNTLLAEPHILPAASINVQDYQGQGGSNGNSKQLQAYLTAAKTYIGIKPAPIMAGFSSRGPSAVQPLILKPDITAPGVNVIAAFTQGAGPSNLASDARRVLFNAQQGTSMSCPHVAGVAGLLKTIHPNWSPAAIKSAIMTTATTLDNTNRPIKDAFDQIATPFEYGAGHIQPNLAMDPGLVYDLSTNDYLDFLCASGYNQALLMLFSKLKISHTCPKSYNIEDFNYPSITVTHRGTNLINVSRTVTNVGPPSTYVVKTHLLEGFKVLVQPSSLTFKTTGEKKTFRVIMQARGVPRHGLPIFGNLSWTDGKHRVTSPIVVLARQKLV 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3321g00008 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 567 577 IPR023828 -
Gabi3321g00008 786 Pfam Subtilase family 142 608 IPR000209 GO:0006508|GO:0008236
Gabi3321g00008 786 Gene3D - 653 781 - -
Gabi3321g00008 786 ProSiteProfiles Serine proteases, subtilase domain profile. 118 636 - -
Gabi3321g00008 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 779 IPR045051 -
Gabi3321g00008 786 SUPERFAMILY Subtilisin-like 113 640 IPR036852 GO:0004252|GO:0006508
Gabi3321g00008 786 CDD PA_subtilisin_like 365 503 - -
Gabi3321g00008 786 Gene3D Peptidase S8/S53 domain 145 649 IPR036852 GO:0004252|GO:0006508
Gabi3321g00008 786 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Gabi3321g00008 786 PRINTS Subtilisin serine protease family (S8) signature 566 582 IPR015500 -
Gabi3321g00008 786 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Gabi3321g00008 786 Coils Coil 782 786 - -
Gabi3321g00008 786 FunFam Subtilisin-like protease SBT1.5 144 369 - -
Gabi3321g00008 786 Gene3D - 359 505 - -
Gabi3321g00008 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 114 IPR037045 -
Gabi3321g00008 786 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Gabi3321g00008 786 Pfam Fibronectin type-III domain 683 779 IPR041469 -
Gabi3321g00008 786 CDD Peptidases_S8_3 111 603 IPR034197 -
Gabi3321g00008 786 FunFam Subtilisin-like protease SBT5.3 19 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3321g00008 Gabi-Chr3321 78894 90649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3321g00008 29 779 Subtilisin-like Serine Gene Family AT2G04160 53.846 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3321g00008 - - gmx:100796255 1234.17