Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3312g00011 ATGTCGCGGCGGTGGCGGTGCACTACTTCGGCGTTGGCGAGGCGCTACTCGGACACAGATTACGACGAGGAGGAGAATATCACCAGGCGATGCCTTTCATGCGAGGATGATTACGACCCCGAAAACGCGGGAACGTGCAAGGTATGCTACGAGGAAGCCAACGAGACAGAGGATGAACTCAAGCGGGAGATCCAAGAATTGAAGTCGAATGTTTCATTCCTGAAGCTGTCTTCTCCCATATATTCTTCCACCAACAGTTCCACCACCGATGTCACCCTTATTCCCTCTGATTACCCTTCTTCTGCCTGCGTTCCAGCTCACAAAGCTGTCCTGGTTAGTCGCTCTCCAGTTTTCAAAGCAATGCTTGAGAATGATATGGAGGAGAGCCGGAGTGGCACCATCAAGATTTCTGATGTATCATATGATGTTCTTTATGCATTTGTTAACTTCTTATACACTGCTGAAGCATGCCTTGATAACCAAATGGCACGGGACCTATTAGTCTTAGCTGAAAAATATGAGGTAATGCATCTTAAGGCGAATTGTGAGAAGTATTTGATGGCTGATATGAATTGGGAGAAAGCTATTGAAAACTATGCCTTTGCACATCTACACAATGTTGAACAATTACTAGATGTAGCCTTGGCAAGGATCACAGACAACATGCACATCCTCACTATCAATGAAGATTACAAGGAGCTGGTGGAAACTAATCCTCGTCTTCTTGTGCAAATATTTGAAGCATATCTTGCCAAACAGGATAATATTGCCGACCCCCTCAAGCTATAG 789 0.4537 MSRRWRCTTSALARRYSDTDYDEEENITRRCLSCEDDYDPENAGTCKVCYEEANETEDELKREIQELKSNVSFLKLSSPIYSSTNSSTTDVTLIPSDYPSSACVPAHKAVLVSRSPVFKAMLENDMEESRSGTIKISDVSYDVLYAFVNFLYTAEACLDNQMARDLLVLAEKYEVMHLKANCEKYLMADMNWEKAIENYAFAHLHNVEQLLDVALARITDNMHILTINEDYKELVETNPRLLVQIFEAYLAKQDNIADPLKL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3312g00011 262 Coils Coil 50 77 - -
Gabi3312g00011 262 Pfam BTB/POZ domain 85 187 IPR000210 GO:0005515
Gabi3312g00011 262 PANTHER SPECKLE-TYPE POZ PROTEIN 28 255 - -
Gabi3312g00011 262 Gene3D - 191 261 - -
Gabi3312g00011 262 ProSiteProfiles BTB domain profile. 89 160 IPR000210 GO:0005515
Gabi3312g00011 262 SUPERFAMILY POZ domain 84 187 IPR011333 -
Gabi3312g00011 262 SMART BTB_4 89 190 IPR000210 GO:0005515
Gabi3312g00011 262 Gene3D Potassium Channel Kv1.1; Chain A 52 190 IPR011333 -
Gabi3312g00011 262 CDD BTB_POZ_ZBTB_KLHL-like 89 173 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gabi3312g00011 BTB 4.5e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3312g00011 K10523 - gmx:100794443 301.212