Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3312g00005 ATGCAGTTTTATCATCATCCGTTTGATTTGGACAGCCAGAAAGTGAGACTTGCGTTGGAAGAGAAAGGCATTGATTATACATCTTACCATGTCAATCCCATCACTGGCAAGAACTTGGATTCCTCATTCTTCAAGACCAATCCCAGTGGAAGACTTCCTATTTTCCAAAATGGCTCTCACATCATTTACGATACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGATATCCTCAGGTTCTGAGAGTATCAGCATCAGTAGCAGGGAAGTGATTGAATGGATGCAGAAGATACAAGAATGGGATCCTAAGTTTTTTACCCTTTTCCATATACCAGAGAAATACCTGATTTATGTTTCCAAGTTCATAAGGAGGGTGGTGATTGCCCGAATGTCTGAGTCTCCTGAGTTAGCAAGTGCTTACCATGAGAAGTTAAGAGAAGCCTATCAGACAGCAGAAAAATTGAAAGACTTAGATGTTTTGAGAAGGAGCAAGGAGCATTTGGTTAGACTTCTTGATGAAGCAGAGATGCAGCTGAGTAAAACACGTTATTTAGCAGGTCAAGAGTTCACCATGGCTGATGTGACGCTCATTCCAGTACTGGCTCGTTTAGTACTATTGGATTTGGAGAATGAGTACATAACTTGCAGACCAAACATTGCTGAGTATTGGGTTTGGGTTCAGCAGAGGCCTAGTTATAGAAAGGTGATTGGTAAGTATTTTGATGGTTGGAGAAAGCACAAAACATTATTAAAATCTTGGTACATTGTTCGTATTAGAAGTTTGCTGAAGAGGTACTAG 804 0.398 MQFYHHPFDLDSQKVRLALEEKGIDYTSYHVNPITGKNLDSSFFKTNPSGRLPIFQNGSHIIYDTIDIIQYIERIAVISSGSESISISSREVIEWMQKIQEWDPKFFTLFHIPEKYLIYVSKFIRRVVIARMSESPELASAYHEKLREAYQTAEKLKDLDVLRRSKEHLVRLLDEAEMQLSKTRYLAGQEFTMADVTLIPVLARLVLLDLENEYITCRPNIAEYWVWVQQRPSYRKVIGKYFDGWRKHKTLLKSWYIVRIRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3312g00005 267 CDD GST_N_family 1 73 - -
Gabi3312g00005 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 251 IPR010987 -
Gabi3312g00005 267 Pfam Glutathione S-transferase, N-terminal domain 12 74 IPR004045 -
Gabi3312g00005 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Gabi3312g00005 267 Coils Coil 159 179 - -
Gabi3312g00005 267 Gene3D Glutaredoxin 1 75 - -
Gabi3312g00005 267 Pfam Glutathione S-transferase, C-terminal domain 162 208 - -
Gabi3312g00005 267 SFLD Glutathione Transferase (cytosolic) 2 225 IPR040079 -
Gabi3312g00005 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Gabi3312g00005 267 SUPERFAMILY GST C-terminal domain-like 155 241 IPR036282 -
Gabi3312g00005 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Gabi3312g00005 267 Gene3D - 121 238 - -
Gabi3312g00005 267 CDD GST_C_family 147 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3312g00005 Gabi-Chr3312 24373 27072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3312g00005 1 267 Glutathione S-transferase Gene Family AT1G77290 68.539 4.69e-140 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3312g00005 K22077 - gmx:100792543 456.062