Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3312g00001 ATGGAAGGGTGGAAGGGTCCACGCTGCTATCAAGGGCCAACTAAGCATGATTATCGTTTGTCCTTCAACTTGAGGGCTGATGTAAAATCTACTATTGATTCTGCTATTGCCACCAATGGATTTGATTTTGTAGATTTTGACGTTATAGAGAAAGAGTCTTCTGATTCCCCTTATTTAGTAGATGTCATCGGTTTAGTTTCTGGAATAGGGGAAGTTCGTGAGCATATTATCTCTGGTAGGAAGACAAAAATGGTTGTCATGGAGCTTGATAACCTCAGCGGTTACACGTTGTCTCAGTTATCAAGTCAGTCCTCATATTCTTTTGAGAATGATTTCCTGAAAGAGACGGAAAGGAAGTGTATCAGTGATGTTAAGAATTGCAGTGAGGTTACTACTTGCATTACTTATGGAACCATAAAATCGATTGAGAGCAAATATAAATGGTGGTACAAGTCCTGTAATAAATGTTCATATTCTGTTTATGAAGATTTCGAGAAATGGTATTGTAAAAACTGCCAAAAACATTTTGATGATTATTATCCAAAATTTTGTGTGCAATTGAGAGTTGTGGATAACACTGATTCTGCATCTTTCATTCTGTTTGATAGAGACTGTGTTGCTTTGTTGGGCATGAGTGCTGCGGATTTACGTGAGAAGCATTTCAAAAGGGGTGATGATTTTGAGCACTATCCTAAGGAACTTAATGTTCTTATTGATAAATCCATGTTGTTTAAAGTGAATGTGAAAAAAAATAATTTGGACTCATACAGTGAGCCTAGGTATCAGATTTCTAAAGATGAAGGATTATTTGACAAGGCTTGCGACAGTGTCGTTGCATCAGCAGAACCGGAAAGAGCTACGGATGTGGAAAGTCAGACGTGTGATAGTGCAGACGTTGGTGATATTTCGCTATCAATGCTGACGCCGTTAAAGAATCCTAATGATCCCCTTCAAGACGATTTTAATTCATCAGTTGTCTGTCCTCCTAAGAAGATTAAGCTAGAGAAAGAGTTGA 1015 0.3803 MEGWKGPRCYQGPTKHDYRLSFNLRADVKSTIDSAIATNGFDFVDFDVIEKESSDSPYLVDVIGLVSGIGEVREHIISGRKTKMVVMELDNLSGYTLSQLSSQSSYSFENDFLKETERKCISDVKNCSEVTTCITYGTIKSIESKYKWWYKSCNKCSYSVYEDFEKWYCKNCQKHFDDYYPKFCVQLRVVDNTDSASFILFDRDCVALLGMSAADLREKHFKRGDDFEHYPKELNVLIDKSMLFKVNVKKNNLDSYSEPRYQISKDEGLFDKACDSVVASAEPERATDVESQTCDSADVGDISLSMLTPLKNPNDPLQDDFNSSVVCPPKKIKLEKEL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3312g00001 338 PANTHER OS03G0429900 PROTEIN 138 295 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gabi3312g00001 338 Gene3D - 102 278 IPR012340 -
Gabi3312g00001 338 SUPERFAMILY Nucleic acid-binding proteins 116 265 IPR012340 -
Gabi3312g00001 338 CDD RPA1_DBD_C 133 273 IPR047192 -
Gabi3312g00001 338 Pfam Replication factor-A C terminal domain 135 265 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3312g00001 Gabi-Chr3312 875 3133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3312g00001 135 263 Core DNA Replication Machinery Family AT5G61000 23.077 1.11e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3312g00001 - - egt:105949498 137.887