Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3309g00031 ATGGCTTTAAGAAAATCAAGTAGACTTCCTCAAACAGCACTTATTAAGCAAATCCTGAAAAGATGCTCAAGTTTGGGGAAGAAACAAGGCTACGATGATCAAGGCCTTCGTTTGGACGTCCCAAAGGGTCACTTTGTTGTATATGTTGGAGAAAACAGAAGCAGACACATTGTTCCAATTTCTTTTCTAACTCGCCCAGAGTTTCAAACCCTTCTCCATCAAGCAGAAGAAGAGTTTGGCTTTGATCATGAAAGGGGTCTCACAATTCCATGTAAAGAAGATACTTTTGAGTCTCTTACATCCATGCTCAGATGA 315 0.4032 MALRKSSRLPQTALIKQILKRCSSLGKKQGYDDQGLRLDVPKGHFVVYVGENRSRHIVPISFLTRPEFQTLLHQAEEEFGFDHERGLTIPCKEDTFESLTSMLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3309g00031 104 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
Gabi3309g00031 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3309g00031 Gabi-Chr3309 272482 272828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3309g00031 39 99 Calmodulin-binding Proteins AT3G43120 54.098 1.81e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3309g00031 K14488 - tcc:18591528 186.037