Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3309g00001 | ATGAGAGGCGTTAATAGACTGATATTTATTGGCAGAGCCTTAAGAACCAATTCCACCGCCGTCTCCGGCGCCGGTGCCGGTGCCACCCTTCGGCAACCACCGCGACTAGCTCCATATGGCACATGCGGGAGTTCTAACCATCACAAGTTCGTTGATCGCTTGGGTCTATCAAGTCCCTCTGTTGCTCGCAGTGTCGCAGGGTTTAGTTATAGTTCTGCTGCTACATCTCTAGCTCAAGACGTTCAAGCAAAGGGTGAAGATTGCTTCAAACCCAAAGAAGTTGTTCTCTTTCAGTACGAGGCTTGTCCTTTCTGCAACAAGGTTAAAGCGTTCCTAGACTATTATAATGTTCCATACAAAGTGGTGGAAGTAAACCCGATGAACAAGAAGGAAATCAAATGGTCTGATTACAAGAAGGTGCCTATAGTTACAGTTGATGGCGAACAAATGGTTGATTCTTCAGAAATAATTGATAAGTTGATCAAAAGGATACATCCAGATTATGACCTAAATGCAGACGAAGAGAAGAAGTGGCGTGAGTGGGTGGATAATCACTTGGTGCATGTTTTGTCACCAAACATATATCGAACTGTTTCTGAGGCTCTTGAATCATTTGACTATATCACCACTCAAGGAAATTTCAGTTTATATGAGAGGTTAGTGGCAAAGTATGGTGGGGCTGCAGCTATGTATTTTGTGTCAAAGAAATTGAAGGAGAAACACAAAATCACTGATGAGCGTGCAGCGTTGTATGGTGCTGCGGAACACTTTGTTGATGCTCTGAATGGCCGAAAATTTCTTGGTGGATTGGATCCTAATTTAGCAGATCTTGCTGTATTTGGTGTTCTACGACCCATACGCCACCTCAAGTCAGGTAGAGATATGGTAGAGCACACGCGGATTGGGAAATGGTTTTCTGAGATGGAACATGCAGTAGGACAGTCTTCCAGGGTCAGTGAGCATAGGTAG | 969 | 0.4427 | MRGVNRLIFIGRALRTNSTAVSGAGAGATLRQPPRLAPYGTCGSSNHHKFVDRLGLSSPSVARSVAGFSYSSAATSLAQDVQAKGEDCFKPKEVVLFQYEACPFCNKVKAFLDYYNVPYKVVEVNPMNKKEIKWSDYKKVPIVTVDGEQMVDSSEIIDKLIKRIHPDYDLNADEEKKWREWVDNHLVHVLSPNIYRTVSEALESFDYITTQGNFSLYERLVAKYGGAAAMYFVSKKLKEKHKITDERAALYGAAEHFVDALNGRKFLGGLDPNLADLAVFGVLRPIRHLKSGRDMVEHTRIGKWFSEMEHAVGQSSRVSEHR | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3309g00001 | 322 | ProSitePatterns | Glutaredoxin active site. | 96 | 112 | IPR011767 | - | |
Gabi3309g00001 | 322 | SFLD | Prostaglandin E synthase like.1 | 53 | 319 | IPR034334 | GO:0050220 | |
Gabi3309g00001 | 322 | ProSiteProfiles | Glutaredoxin domain profile. | 82 | 181 | - | - | |
Gabi3309g00001 | 322 | Gene3D | Glutaredoxin | 83 | 165 | - | - | |
Gabi3309g00001 | 322 | Gene3D | - | 170 | 319 | - | - | |
Gabi3309g00001 | 322 | SFLD | Glutathione Transferase (cytosolic) | 53 | 319 | IPR040079 | - | |
Gabi3309g00001 | 322 | SUPERFAMILY | Thioredoxin-like | 93 | 186 | IPR036249 | - | |
Gabi3309g00001 | 322 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 92 | 169 | IPR004045 | - | |
Gabi3309g00001 | 322 | PANTHER | MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 | 46 | 320 | - | - | |
Gabi3309g00001 | 322 | CDD | GST_C_mPGES2 | 168 | 313 | IPR034335 | - | |
Gabi3309g00001 | 322 | SUPERFAMILY | GST C-terminal domain-like | 172 | 312 | IPR036282 | - | |
Gabi3309g00001 | 322 | Pfam | Glutathione S-transferase, N-terminal domain | 96 | 163 | IPR004045 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3309g00001 | Gabi-Chr3309 | 19050 | 21765 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3309g00001 | 35 | 176 | Glutathione S-transferase Gene Family | AT5G16710 | 31.544 | 1.87e-08 | 52.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3309g00001 | K05309 | - | gmx:100804696 | 476.863 |