Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3309g00001 ATGAGAGGCGTTAATAGACTGATATTTATTGGCAGAGCCTTAAGAACCAATTCCACCGCCGTCTCCGGCGCCGGTGCCGGTGCCACCCTTCGGCAACCACCGCGACTAGCTCCATATGGCACATGCGGGAGTTCTAACCATCACAAGTTCGTTGATCGCTTGGGTCTATCAAGTCCCTCTGTTGCTCGCAGTGTCGCAGGGTTTAGTTATAGTTCTGCTGCTACATCTCTAGCTCAAGACGTTCAAGCAAAGGGTGAAGATTGCTTCAAACCCAAAGAAGTTGTTCTCTTTCAGTACGAGGCTTGTCCTTTCTGCAACAAGGTTAAAGCGTTCCTAGACTATTATAATGTTCCATACAAAGTGGTGGAAGTAAACCCGATGAACAAGAAGGAAATCAAATGGTCTGATTACAAGAAGGTGCCTATAGTTACAGTTGATGGCGAACAAATGGTTGATTCTTCAGAAATAATTGATAAGTTGATCAAAAGGATACATCCAGATTATGACCTAAATGCAGACGAAGAGAAGAAGTGGCGTGAGTGGGTGGATAATCACTTGGTGCATGTTTTGTCACCAAACATATATCGAACTGTTTCTGAGGCTCTTGAATCATTTGACTATATCACCACTCAAGGAAATTTCAGTTTATATGAGAGGTTAGTGGCAAAGTATGGTGGGGCTGCAGCTATGTATTTTGTGTCAAAGAAATTGAAGGAGAAACACAAAATCACTGATGAGCGTGCAGCGTTGTATGGTGCTGCGGAACACTTTGTTGATGCTCTGAATGGCCGAAAATTTCTTGGTGGATTGGATCCTAATTTAGCAGATCTTGCTGTATTTGGTGTTCTACGACCCATACGCCACCTCAAGTCAGGTAGAGATATGGTAGAGCACACGCGGATTGGGAAATGGTTTTCTGAGATGGAACATGCAGTAGGACAGTCTTCCAGGGTCAGTGAGCATAGGTAG 969 0.4427 MRGVNRLIFIGRALRTNSTAVSGAGAGATLRQPPRLAPYGTCGSSNHHKFVDRLGLSSPSVARSVAGFSYSSAATSLAQDVQAKGEDCFKPKEVVLFQYEACPFCNKVKAFLDYYNVPYKVVEVNPMNKKEIKWSDYKKVPIVTVDGEQMVDSSEIIDKLIKRIHPDYDLNADEEKKWREWVDNHLVHVLSPNIYRTVSEALESFDYITTQGNFSLYERLVAKYGGAAAMYFVSKKLKEKHKITDERAALYGAAEHFVDALNGRKFLGGLDPNLADLAVFGVLRPIRHLKSGRDMVEHTRIGKWFSEMEHAVGQSSRVSEHR 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi3309g00001 322 ProSitePatterns Glutaredoxin active site. 96 112 IPR011767 -
Gabi3309g00001 322 SFLD Prostaglandin E synthase like.1 53 319 IPR034334 GO:0050220
Gabi3309g00001 322 ProSiteProfiles Glutaredoxin domain profile. 82 181 - -
Gabi3309g00001 322 Gene3D Glutaredoxin 83 165 - -
Gabi3309g00001 322 Gene3D - 170 319 - -
Gabi3309g00001 322 SFLD Glutathione Transferase (cytosolic) 53 319 IPR040079 -
Gabi3309g00001 322 SUPERFAMILY Thioredoxin-like 93 186 IPR036249 -
Gabi3309g00001 322 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 92 169 IPR004045 -
Gabi3309g00001 322 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 46 320 - -
Gabi3309g00001 322 CDD GST_C_mPGES2 168 313 IPR034335 -
Gabi3309g00001 322 SUPERFAMILY GST C-terminal domain-like 172 312 IPR036282 -
Gabi3309g00001 322 Pfam Glutathione S-transferase, N-terminal domain 96 163 IPR004045 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi3309g00001 Gabi-Chr3309 19050 21765 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3309g00001 35 176 Glutathione S-transferase Gene Family AT5G16710 31.544 1.87e-08 52.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3309g00001 K05309 - gmx:100804696 476.863