Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3307g00048 ATGGCGAAGACACTGATTTCGTCTCCATCATTCATCGGAACGCCGCTTCCTTCACTCCCTCGCCACCACTTCACTCACCACCGCACAAGGCTAGTCTCCACCAAGGTTCAATTCAGCTTCCACCAAATTCCCCCAATTCAATCCATAAACCATTCCATTGACTTCGCCGATATCGTCACCAGAGCTGAAGGCCTTCTTTACACGCTCGCCGACGCCGCGGTTGCGGCGGATTCGGCGACTTCCACTGATGCTGCCGTGCAGAAGAACGGAGGCTGGTTCGGCTTCATCTCCGACGCCATGGAATTTATTCTCAAGGTGCTAAAGGATGGTCTTGCCGCCGTGCATGTGCCTTACACATATGGATTTGCTATCATATTGCTCACTGTGTTAGTTAAGGCCGCGACACTTCCCTTGACAAAGCAACAGGTCGAATCAACACTGGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACGGCAAGGCTATATAGGGAGGCGGGGGTTAACCCATTGGCAGGTTGTTTACCGACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAGGGACTGTTAACAGAAGGTTTCCTTTGGATCCCCTCGCTGGGTGGTCCTACTACCATTGCTGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGTCATCCACCTTTGGGTTGGTCGGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTGTTGTTTCTCAATTCGTTTCGATGGAAATCATGAAACCACCTCAGACAAATGATCCTACTCAAAAGAATACACTTCTTGTTTTCAAGTTTCTTCCACTCATGATCGGTTACTTCTCTCTATCTGTCCCATCAGGACTAACAATTTACTGGTTTATAAATAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAACCTGTTGTAAATGAAAATGCTAGTGGAATTATCACTGCAGGACGTGCTAAAAGATCAGATTCTCAGCCAGCAAAGGCTGGTGAAAGGTTTAGGCAATTAAAACAAGAGAAGAAAATGTTAAGCAAGGCACTGCCAGTGGAAGAAGTTCAACCTCTGGCTTCTGGTTCTAATTCTGACGATGGCTCGGATGTAGAAAGTGACAAGAAGGGAGAGGAAGTTGCAGAAGAAGCATTTGCTTCTAAAGTTGGCGAAGAGGTTCAAAATTATTCTAGGGAAAGAAGAAGCAAGCGCTCGAAGCGGAAGCGTGCTGTATAA 1332 0.4557 MAKTLISSPSFIGTPLPSLPRHHFTHHRTRLVSTKVQFSFHQIPPIQSINHSIDFADIVTRAEGLLYTLADAAVAADSATSTDAAVQKNGGWFGFISDAMEFILKVLKDGLAAVHVPYTYGFAIILLTVLVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETARLYREAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWSDTAAYLVLPILLVVSQFVSMEIMKPPQTNDPTQKNTLLVFKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSDSQPAKAGERFRQLKQEKKMLSKALPVEEVQPLASGSNSDDGSDVESDKKGEEVAEEAFASKVGEEVQNYSRERRSKRSKRKRAV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3307g00048 443 MobiDBLite consensus disorder prediction 383 443 - -
Gabi3307g00048 443 MobiDBLite consensus disorder prediction 400 418 - -
Gabi3307g00048 443 NCBIfam membrane protein insertase YidC 119 333 IPR028055 -
Gabi3307g00048 443 CDD 5TM_YidC_Alb3 121 334 IPR047196 -
Gabi3307g00048 443 Pfam 60Kd inner membrane protein 120 334 IPR028055 -
Gabi3307g00048 443 PANTHER OXA1 72 376 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3307g00048 Gabi-Chr3307 359043 364773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3307g00048 22 381 Chloroplast and Mitochondria Gene Families AT2G28800 69.890 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3307g00048 K03217 - gmx:100817173 727.628