Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3307g00016 ATGTCTTTACAAAACAAGGGATTTTGGATGGTAAAGGGTTCTGGACACATTAATGACAGGGAGACTGCATTTGATAATCCTTCCAAAATTGAATCAAAACGACCTCATCAGTGGTTTGCTGATGCTGCTGAAGTTGATTTTTTTCCAAACAAAAAACAAGCTTTAGAAGATGCGAATGAAAAATCTAGTTCAGGACTTTCAAATGTAAATTTTTCTCCATGGGAGAATGATTCCAATTTTCATTCAGTCCCAAGCCATTTCATTGGTCGGTTATTTGGATCTGAAACTAGGCCTGTCAATTTCACCGAAAAGAATACTTATGTTCCGGCTGATGATTCTGATATGAGATCAAAGATGATCACCAATCAATATGGAGATGATGCATCTTTTGGCTTGTCTATATCTCATTCCGTCGTAGATTCTGAAGCATGTATAAATTTTGGTGGAATCAAAAAAGTCAAAGTAAATCAGGTTAAGGATTTTGATGATGTACCGGATCCGGAGGGACATAATTTTAGTAGACAGAGTAATGGCGATCCACATCAGGCCTATAATGGGGAAGTTGAGGGAAGCTACAGCAGAGGGGATGATGCCCATGTTAGATCATTTGGTGCCCCTTTTGGCAAAGGAGATGACTCAATCATATCAATTGGTGAATCCTATAACAAAGAGGACACAAATATAATTTCTTTTGGTGGGTTCCCTGATGAACGGGATATTATCTCTGTGGGAAGGCCTGCTGCAGAGTACGGTCAATCATATAATCAATCTTCAGTTCATGTGTCAACAACAGCTCATGAGAAAGAGTTGTATGCATCAAATTCTGATGTAGTCGCAAGTACGCATCAGATAGTAAAAGTAAAGTCTGAAACTATGGCAAAGAATAAACAAGAGTTCAAAACTGCAAGGAAAGAAGCTCCAAACAGTTTCCCTTCTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTAAAGTATGTCTCAGGGGCGCGGGAGGAACATCGTGGAATTATAAAAGGCTCTGGCTATCTTTGTGGGTGTCAGTCATGTAACTATTCCAAGGTTTTGAATGCTTATGAATTTGAGAGACATGCTGGTTGCAAAACAAAACATCCAAACAACCATATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAGGAGTACCCCAGAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCAATCAATCAGAAAGCATTTCGCAGTTGGAAAGAATCATTTCAAGCAGCAACTAGAGAGCTTCAACGCATTTACGGAAAGGAAGAACTTAACCTATAA 1338 0.3864 MSLQNKGFWMVKGSGHINDRETAFDNPSKIESKRPHQWFADAAEVDFFPNKKQALEDANEKSSSGLSNVNFSPWENDSNFHSVPSHFIGRLFGSETRPVNFTEKNTYVPADDSDMRSKMITNQYGDDASFGLSISHSVVDSEACINFGGIKKVKVNQVKDFDDVPDPEGHNFSRQSNGDPHQAYNGEVEGSYSRGDDAHVRSFGAPFGKGDDSIISIGESYNKEDTNIISFGGFPDERDIISVGRPAAEYGQSYNQSSVHVSTTAHEKELYASNSDVVASTHQIVKVKSETMAKNKQEFKTARKEAPNSFPSNVRSLISTGMLDGVPVKYVSGAREEHRGIIKGSGYLCGCQSCNYSKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGAPINQKAFRSWKESFQAATRELQRIYGKEELNL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3307g00016 445 PANTHER AUTOIMMUNE REGULATOR 8 398 - -
Gabi3307g00016 445 MobiDBLite consensus disorder prediction 167 195 - -
Gabi3307g00016 445 Pfam Tify domain binding domain 340 395 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3307g00016 Gabi-Chr3307 165760 169871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3307g00016 292 428 PHD Transcription Factor Family AT3G53680 51.449 2.02e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3307g00016 - - gmx:100802229 772.311