Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3307g00015 ATGTCTTTACAAAACAAGGGATTTTGGATGGTAAAGGGTTCTGGACACATTAATGACAGGGAGACTGCATTTGATAATCCTTCCAAAATTGAATCAAAACGACCTCATCAGTGGTTTGCTGATGCTGCTGAAGTTGATTTTTTTCCAAACAAAAAACAAGCTTTAGAAGATGCGAATGAAAAATCTAGTTCAGGACTTTCAAATGTAAATTTTTCTCCATGGGAGAATGATTCCAATTTTCATTCAGTCCCAAGCCATTTCATTGGTCGGTTATTTGGATCTGAAACTAGGCCTGTCAATTTCACCGAAAAGAATACTTATGTTCCGGCTGATGATTCTGATATGAGATCAAAGATGATCACCAATCAATATGGAGATGATGCATCTTTTGGCTTGTCTATATCTCATTCCGTCGTAGATTCTGAAGCATGTATAAATTTTGGTGGAATCAAAAAAGTCAAAGTAAATCAGGTTAAGGATTTTGATGATGTACCGGATCCGGAGGGACATAATTTTAGTAGACAGAGTAATGGCGATCCACATCAGGCCTATAATGGGGAAGTTGAGGGAAGGTCTGCATCAATAGGGCAAGCCTTTGACAAGGATGGTGATGTCACTTTAATGGGACTCAGCTACAGCAGAGGGGATGATGCCCATGTTAGATCATTTGGTGCCCCTTTTGGCAAAGGAGATGACTCAATCATATCAATTGGTGAATCCTATAACAAAGAGGACACAAATATAATTTCTTTTGGTGGGTTCCCTGATGAACGGGATATTATCTCTGTGGGAAGGCCTGCTGCAGAGTACGGTCAATCATATAATCAATCTTCAGTTCATGTGTCAACAACAGCTCATGAGAAAGAGTTGTATGCATCAAATTCTGATGTAGTCGCAAGTACGCATCAGATAGTAAAAGTAAAGTCTGAAACTATGGCAAAGAATAAACAAGAGTTCAAAACTGCAAGGAAAGAAGCTCCAAACAGTTTCCCTTCTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTAAAGTATGTCTCAGGGGCGCGGGAGGAACATCGTGGAATTATAAAAGGCTCTGGCTATCTTTGTGGGTGTCAGTCATGTAACTATTCCAAGGTTTTGAATGCTTATGAATTTGAGAGACATGCTGGTTGCAAAACAAAACATCCAAACAACCATATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAGGAGTACCCCAGAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCAATCAATCAGAAAGCATTTCGCAGTTGGAAAGAATCATTTCAAGCAGCAACTAGAGAGCTTCAACGCATTTACGGAAAGGAAGAACTTAACCTATAA 1398 0.3898 MSLQNKGFWMVKGSGHINDRETAFDNPSKIESKRPHQWFADAAEVDFFPNKKQALEDANEKSSSGLSNVNFSPWENDSNFHSVPSHFIGRLFGSETRPVNFTEKNTYVPADDSDMRSKMITNQYGDDASFGLSISHSVVDSEACINFGGIKKVKVNQVKDFDDVPDPEGHNFSRQSNGDPHQAYNGEVEGRSASIGQAFDKDGDVTLMGLSYSRGDDAHVRSFGAPFGKGDDSIISIGESYNKEDTNIISFGGFPDERDIISVGRPAAEYGQSYNQSSVHVSTTAHEKELYASNSDVVASTHQIVKVKSETMAKNKQEFKTARKEAPNSFPSNVRSLISTGMLDGVPVKYVSGAREEHRGIIKGSGYLCGCQSCNYSKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGAPINQKAFRSWKESFQAATRELQRIYGKEELNL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3307g00015 465 PANTHER AUTOIMMUNE REGULATOR 8 174 - -
Gabi3307g00015 465 MobiDBLite consensus disorder prediction 164 186 - -
Gabi3307g00015 465 Pfam Tify domain binding domain 360 415 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3307g00015 Gabi-Chr3307 165760 169871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3307g00015 312 448 PHD Transcription Factor Family AT3G53680 51.449 3.30e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3307g00015 - - gmx:100802229 817.764