Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3307g00008 ATGACTTTTGGTTTGGTTTACACTGTGTATGTCACTGCAGTAGACCCAAAGAAGGGTAACCTTGGGATAATTGCTCCAATTGCAATTGGTTTCACTGTGGATGCTAACATTTTGGCAGCCCGTGCCTTTGATGGAGCATCCAGGAACCCAGCAGTGTCTTTTGGACCCGCTGTAGTTAGCTGGACTTGGGATAATCATTGGGTATACTGGGTCGGCCAATCAATTGGTTCTGCTGTTGTTCACGAGATTTTCTTCATCACCCCAAAAACTTATGAACAGCTCCCCTCTACAGAATAG 297 0.4545 MTFGLVYTVYVTAVDPKKGNLGIIAPIAIGFTVDANILAARAFDGASRNPAVSFGPAVVSWTWDNHWVYWVGQSIGSAVVHEIFFITPKTYEQLPSTE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3307g00008 98 PRINTS Major intrinsic protein family signature 30 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3307g00008 98 PRINTS Major intrinsic protein family signature 67 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3307g00008 98 PANTHER AQUAPORIN-8 1 87 IPR034294 -
Gabi3307g00008 98 Pfam Major intrinsic protein 1 79 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3307g00008 98 Gene3D Glycerol uptake facilitator protein. 1 97 IPR023271 -
Gabi3307g00008 98 SUPERFAMILY Aquaporin-like 1 87 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3307g00008 Gabi-Chr3307 105161 105457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3307g00008 1 98 Major Intrinsic Protein MIP AT2G36830 68.317 5.74e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3307g00008 K09873 - qsa:O6P43_028281 169.474