Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3307g00005 ATGGCTCCTGCTAAAGTTGATAGTTCTAAGAAGACTGATCCAAAGGCACAGGCCTTGAAAACTGCTAAAGCAGTGAAATCAGGTGCTACCTTTAAGAAGAAGGCCAAGAAAATCCGAACATCTGTTACGTTCCATCGACCTAGGACATTGAAGAAGGATAGAAACCCCAAATACCCACGCATTAGTGCCCCACCAAGGAATAAGCTTGATCACTATCAGATTCTTAAGTTCCCTCTCACCACCGAATCTGCCATGAAGAAGATTGAAGACAACAACACTTTGGTTTTCATTGTTGACCTACGTGCTGACAAGAAGAAGATAAAGGATGCAGTGAAGAAGATGTATGACATCCAGGCCAAGAAGGTTAACACATTGATCAGGCCTGATGGCACCAAGAAGGCCTATGTGAGGTTGACTCCTGATTATGATGCATTGGACGTAGCAAACAAGATTGGGATCATCTAA 465 0.4323 MAPAKVDSSKKTDPKAQALKTAKAVKSGATFKKKAKKIRTSVTFHRPRTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi3307g00005 154 PANTHER 60S RIBOSOMAL PROTEIN L23A 7 154 IPR013025 GO:0003735|GO:0005840|GO:0006412
Gabi3307g00005 154 FunFam 60S ribosomal protein L23a 33 154 - -
Gabi3307g00005 154 Pfam Ribosomal protein L23, N-terminal domain 15 64 IPR005633 -
Gabi3307g00005 154 Hamap 50S ribosomal protein L23 [rplW]. 74 154 IPR013025 GO:0003735|GO:0005840|GO:0006412
Gabi3307g00005 154 ProSitePatterns Ribosomal protein L23 signature. 132 147 IPR001014 GO:0019843
Gabi3307g00005 154 Gene3D - 35 154 IPR012677 -
Gabi3307g00005 154 NCBIfam 50S ribosomal protein L23 78 154 IPR019985 GO:0003735|GO:0005840|GO:0006412
Gabi3307g00005 154 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 71 147 IPR012678 GO:0003735|GO:0005840|GO:0006412
Gabi3307g00005 154 Pfam Ribosomal protein L23 74 136 IPR013025 GO:0003735|GO:0005840|GO:0006412
Gabi3307g00005 154 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi3307g00005 Gabi-Chr3307 38887 40859 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3307g00005 1 154 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 87.013 1.49e-70 207