Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3306g00029 ATGGTGGAGATGGGTTGTATAGGGGTTATCCTTGTGGCCATTTGTAGTGCTTTTATGTTAATTAGATCCCTCCTCAAGAATGTAAATTGGTGGCTCTATGAATCCCACTTGGGAATGAAGCAGTACTCTCTTCCACCTGGTGACATGGGCTGGCCCATCATTGGCAACATGTGGTCTTTCCTCAGAGCTTTCAAGTCTAGTGATCCTGATTCCTTCATCTCCTCCTTTGTGTCCAGATTTGGAAGGACCGGAATATATAAGGCCTTGATGTTTGGAAGCCCAAGTGTAATTGTGATAACACCTGAAGCATGCAGAAGAGTTTTGACAGATGATGATAACTTTATTCTTGGTTGGCCTCGTTCTACGGTTGAGCTTATTGGAAAGAAATCATTCATTGCAATGTCTTATGAAGAACATAAACGTCTTAGGCGTTTGACATCTTCTTCAATCAATGGCTTTGAAGCACTGTCCTTGTACTTGGTATATATTGAAGAAATTGTGAAAAGTTCATTGGAGAAATGGGCCAACATGGGACAAATAGAGTTTTTAACTGAGCTCAGGAAGCTTACTTTTAAAATCATTGTGCATATTTTCCTTGGCTCTGAGGGTAACGCTTTTATGGAATCTTTGGAAAGGGAATACACGGCACTTAATTTTGGAGTTAGAGCCATGCGAATTAATATTCCTGGATTTGCATTTCATAAAGCCTTCAAGGCTAGGAAAACTCTGGTGGCAATATTTCAATCTATCGTGAATGAGCGAAGGAAACAAAGGAAGGAAAATTTGTCCAGACAAAACAAAGACATGTTGGATGCTCTGATTGATGTTGAAGATGAAAATGGAAGAAAATTGAGCGATGAAGAAATCATTGATGTTATGATAATGTACTTGAATGCAGGCCATGAGTCTTCAGGACATATTACCATGTGGACCACCTTGCTCCTGCAAAAGCACCCAAAATATTTCCAAAAGGCTAAGGCTGAACAGGAAGAAATAATAAAGAAAAGGCCACCTACACAGAAGGGGTTGACACTTCAGGAAATTCGGCAGATGGAGTTTCTTTCTAAGGTGATTGATGAAACAATGCGTGTGATTACATTCTCATTGATGACCTTTCGCGAGGCAAAATCTGATGTCAGGATCAATGGCTACACCATTCCAAAAGGTTGGAAAGTACTGGTTTGGTACAGGTCCGTTCACCTTGATCCTGAAATATATCCTAATCCAAAGCAATTTGAGCCTTCAAGATGGAATACCGTACACAAGGCTGGAGAATTCCTTCCCTTTGGAGCAGGAACCAGATTGTGTCCAGGGAATGATCTCGCTAAGCTAGAAATCACAGTTTTTCTTCATCATTTTCTTCTGAATTATCAGCTTGAACAACTTAATCCTACATGTCCTGTGATGTACTTACCGCATACAAGGCCCAAGGACAATTGCTTGGCAAGAGTCCAGAAATGTTCATCTGCATCAACCTAA 1479 0.4057 MVEMGCIGVILVAICSAFMLIRSLLKNVNWWLYESHLGMKQYSLPPGDMGWPIIGNMWSFLRAFKSSDPDSFISSFVSRFGRTGIYKALMFGSPSVIVITPEACRRVLTDDDNFILGWPRSTVELIGKKSFIAMSYEEHKRLRRLTSSSINGFEALSLYLVYIEEIVKSSLEKWANMGQIEFLTELRKLTFKIIVHIFLGSEGNAFMESLEREYTALNFGVRAMRINIPGFAFHKAFKARKTLVAIFQSIVNERRKQRKENLSRQNKDMLDALIDVEDENGRKLSDEEIIDVMIMYLNAGHESSGHITMWTTLLLQKHPKYFQKAKAEQEEIIKKRPPTQKGLTLQEIRQMEFLSKVIDETMRVITFSLMTFREAKSDVRINGYTIPKGWKVLVWYRSVHLDPEIYPNPKQFEPSRWNTVHKAGEFLPFGAGTRLCPGNDLAKLEITVFLHHFLLNYQLEQLNPTCPVMYLPHTRPKDNCLARVQKCSSAST 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3306g00029 492 Pfam Cytochrome P450 45 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 FunFam Ent-kaurenoic acid oxidase 35 487 - -
Gabi3306g00029 492 CDD CYP90-like 77 486 - -
Gabi3306g00029 492 Gene3D Cytochrome P450 34 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 PANTHER CYTOCHROME P450 26 41 476 - -
Gabi3306g00029 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Gabi3306g00029 492 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 Coils Coil 252 279 - -
Gabi3306g00029 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3306g00029 492 SUPERFAMILY Cytochrome P450 40 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3306g00029 Gabi-Chr3306 371425 375720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3306g00029 1 487 Cytochrome P450 AT2G32440 67.213 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3306g00029 K04123 - gmx:100781238 815.068