Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3306g00017 ATGGAGTCCAAGTGGAAGATGAAGAAGCAACCAAGGAGGCTGGAGCGTCTCAACGCCAAGAAGAACATCGATTACGAACCCCCAGGCTGTTCTTCCTTGGACTTGGAGCTCCAAACTAGCCTCAGGGTCACTGGCATCGACGGTGAATTCGACCGTATATGTCAAAGTTTGGGGCTTTCTGGACCCCAAGACTTTGAAATCCCAACCGCAGATTGGGAAGCTCGAAAGGCTCGCTTTTGTGATAACAGGGCAAAGGAGGAACGAGTTTCAGCTAAATTGGCAACTGGGGTTGTGTCTAATTGTGATGCTGAGCTGAAAAATGATACCTTTGATGTGGAAGACTTGAGGGTTGAGGTTTTGGGTTGTGATAATGGAGATGGGGTTGGTGGAGGAGGGATCAAAGGTGTTAGGCCTCCTATTTTGACTCCACCCCCAGTGATTTTGAAGCCAATTGTTGATGGGGTGAGTTCTACTTGGGATCTCATGAGGTCTTTTGCACCCCAAGATGTTGGTGTTGTTGATTCTCCTTCATCTTCTGGTGAACATGATGGTAGGGGAATTGTTGGTCGACTGAGACTTGGGGAAAGGAGTGTTCTTTTTTCTGATTCTAGTTCGTGCACTACTTCCCATGATGATGATAGTGATGTTGGTGGTGAAAGGGGTTGTTCTTTGTCTTGTTCTGGTTCTGGCGGCGTTCATGAGTTGGTTCATTATGTCTCGTCAAATGAGTGGTTTAGACGAACTTTCTCTTCGTGGCAAAAGGGTGATGTTTTGGGAAAGGGGTCCTTTGGAACGGTTTATGAAGGCTTTACGGAGGCCGGATTCTTTTTTGCGGTAAAGGAGGTGTCTTTACTGGATGAAGGTAGCCATGGAAAACAGAGCATTTTACAACTTCAGCAGGAAATATCTCTTTTGAGTCAGTTTGAACATGAGAACATAGTTCAATATTATGGCTCAGACAAGGACAAAAGTACACTATTTATCTTCCTTCAGCTTGTGTCGAAAGGGTCGTTGGCAAGTCTCTATCAAAAGTATCGTTTAAACGATTCTCAAGTTTCTGCATACACGAGGCAGATTTTATGTGGCTTGAAGTATCTTCATGATCGTAAAGTGGTACACAGGGATATCAAGTGTGCTAATATACTGGTTGATGTAAACGGGTTAGTGAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACAAAATTGAATGATGTTAAGTCAAGCAAAGGCTCCCCATACTGGATGGCTCCTGAGGTTGTTAACTTAAGGAACCAAGGTTACGGGCTAGCAGCTGATATATGGAGCTTAGGATGTACAGTTTTAGAGATGTTGACAAGGCAGCCTCCTTACTCTGATTTGGAAGGGATGCAAGCATTGTTTCAGATTGGCCGCGGTGAAACTCCACCTATTCCTGAATCTTTATCTAAAGATGCCCGAGATTTCATTCTTACATGCTTACAAGTTAACCCAAATAAACGGCCAACTGCAGCTCAGCTATTGGATCATCCATTTCTAAGGAGACCATTTCCACCTCCCTTAAGTCCTGCTTCTCCACATGTTAATATCTTTCGGTTTTAA 1578 0.4423 MESKWKMKKQPRRLERLNAKKNIDYEPPGCSSLDLELQTSLRVTGIDGEFDRICQSLGLSGPQDFEIPTADWEARKARFCDNRAKEERVSAKLATGVVSNCDAELKNDTFDVEDLRVEVLGCDNGDGVGGGGIKGVRPPILTPPPVILKPIVDGVSSTWDLMRSFAPQDVGVVDSPSSSGEHDGRGIVGRLRLGERSVLFSDSSSCTTSHDDDSDVGGERGCSLSCSGSGGVHELVHYVSSNEWFRRTFSSWQKGDVLGKGSFGTVYEGFTEAGFFFAVKEVSLLDEGSHGKQSILQLQQEISLLSQFEHENIVQYYGSDKDKSTLFIFLQLVSKGSLASLYQKYRLNDSQVSAYTRQILCGLKYLHDRKVVHRDIKCANILVDVNGLVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNQGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFQIGRGETPPIPESLSKDARDFILTCLQVNPNKRPTAAQLLDHPFLRRPFPPPLSPASPHVNIFRF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3306g00017 525 FunFam Mitogen-activated protein kinase 1, putative, expressed 250 517 - -
Gabi3306g00017 525 SMART serkin_6 252 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3306g00017 525 Gene3D Transferase(Phosphotransferase) domain 1 250 515 - -
Gabi3306g00017 525 Pfam Protein kinase domain 253 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3306g00017 525 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 155 511 - -
Gabi3306g00017 525 ProSitePatterns Protein kinases ATP-binding region signature. 258 280 IPR017441 GO:0005524
Gabi3306g00017 525 SUPERFAMILY Protein kinase-like (PK-like) 238 519 IPR011009 -
Gabi3306g00017 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Gabi3306g00017 525 ProSiteProfiles Protein kinase domain profile. 252 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3306g00017 Gabi-Chr3306 228208 237094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3306g00017 133 510 MAP Kinase Kinase Kinase AT4G08500 54.404 2.26e-134 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi3306g00017 Pkinase 9.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3306g00017 K13414 - aip:107631583 614.379