Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3306g00008 ATGGCGTCGTCGAAGTTTGTCTCGACGAATCCGGATCTGCCACGCGAATCTTCTATATCTTCCCTCACTACCCTTCTCTCCGATCTCCAACCTAACACCATGGACGACCTTCTCAAGTCCATATACACTCCTCATCCTCAACCACCACCTTCAAAGGACACCCCCACCACCTCCTCCTCCGCCGCCGCCACCAAGACCGTCGACGACGTTTGGAAGGAGATCGTCTCCGGCGGCAGCCACCCTCAAAGGGGTGCGGATAGTGGTGGTGATGATGATGATGATGGAGGAGATGGTGGTGGTGGTGAGGGCTTGGAGGAGATGACCCTTGAAGATTTCTTAACCAAGGCTGGTGCTGTTAGAGAAGAAGATATTAGAGGGGTTGTTCCTTCTGTTATTAATGAGGGTTCTTCTTCTGTTGAGGCTTTTGGAAATGGAAATGGGATTGGAGCATCATCAGCATCAGCTTCAGTTGGAAAAGGAAAAAGAAGGGCTGTGGAGGAACCTGTTGATAAAGCCACTCTTCAGAAACAGAGAAGAATGATCAAGAATAGAGAGTCTGCCGCCAGGTCCAGGGAACGCAAGCAGGCTTACACATCTGAGCTTGAGTATCTGGTTCAGCAGTTGGAGCAAGAGAATACGCGATTAATAAATGAAGAGGCTGATAAGAAAAGGCAGAGGTTAAAGCAGCTCAAAGAGTTCCTCATTCCAATTGAGGAGAAGCCTAAACAGAAACTAAGGCTTCAGAGAACAAATTCAGTCCAATCATTATAA 771 0.4825 MASSKFVSTNPDLPRESSISSLTTLLSDLQPNTMDDLLKSIYTPHPQPPPSKDTPTTSSSAAATKTVDDVWKEIVSGGSHPQRGADSGGDDDDDGGDGGGGEGLEEMTLEDFLTKAGAVREEDIRGVVPSVINEGSSSVEAFGNGNGIGASSASASVGKGKRRAVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVQQLEQENTRLINEEADKKRQRLKQLKEFLIPIEEKPKQKLRLQRTNSVQSL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3306g00008 256 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 174 232 - -
Gabi3306g00008 256 Pfam bZIP transcription factor 172 230 IPR004827 GO:0003700|GO:0006355
Gabi3306g00008 256 Coils Coil 198 228 - -
Gabi3306g00008 256 Gene3D - 174 236 - -
Gabi3306g00008 256 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 238 IPR043452 GO:0003700|GO:0045893
Gabi3306g00008 256 CDD bZIP_plant_BZIP46 175 215 - -
Gabi3306g00008 256 SMART brlzneu 171 235 IPR004827 GO:0003700|GO:0006355
Gabi3306g00008 256 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 225 IPR004827 GO:0003700|GO:0006355
Gabi3306g00008 256 MobiDBLite consensus disorder prediction 36 115 - -
Gabi3306g00008 256 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Gabi3306g00008 256 MobiDBLite consensus disorder prediction 146 170 - -
Gabi3306g00008 256 SUPERFAMILY Leucine zipper domain 175 225 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3306g00008 Gabi-Chr3306 66136 69575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3306g00008 7 244 bZIP Transcription Factor Family AT5G44080 38.095 4.19e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3306g00008 bZIP_1 3.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3306g00008 K14432 - gmx:100101890 213.001