Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3306g00007 ATGGCGTCGTCGAAGTTTGTCTCGACGAATCCGGATCTGCCACGCGAATCTTCTATATCTTCCCTCACTACCCTTCTCTCCGATCTCCAACCTAACACCATGGACGACCTTCTCAAGTCCATATACACTCCTCATCCTCAACCACCACCTTCAAAGGACACCCCCACCACCTCCTCCTCCGCCGCCGCCACCAAGACCGTCGACGACGTTTGGAAGGAGATCGTCTCCGGCGGCAGCCACCCTCAAAGGGGTGCGGATAGTGGTGGTGATGATGATGATGATGGAGGAGATGGTGGTGGTGGTGAGGGCTTGGAGGAGATGACCCTTGAAGATTTCTTAACCAAGGCTGGTGCTGTTAGAGAAGAAGATATTAGAGGGGTTGTTCCTTCTGTTATTAATGAGGGTTCTTCTTCTGTTGAGGCTTTTGGAAATGGAAATGGGATTGGAGCATCATCAGCATCAGCTTCAGTTGGAAAAGGAAAAAGAAGGGCTGTGGAGGAACCTGTTGATAAAGCCACTCTTCAGAAACAGAGAAGAATGATCAAGAATAGAGAGTCTGCCGCCAGGTCCAGGGAACGCAAGCAGGCTTACACATCTGAGCTTGAGTATCTGGTTCAGCAGTTGGAGCAAGAGAATACGCGATTAATAAATGAAGAGCTCAAAGAGTTCCTCATTCCAATTGAGGAGAAGCCTAAACAGAAACTAAGGCTTCAGAGAACAAATTCAGTCCAATCATTATAA 741 0.4845 MASSKFVSTNPDLPRESSISSLTTLLSDLQPNTMDDLLKSIYTPHPQPPPSKDTPTTSSSAAATKTVDDVWKEIVSGGSHPQRGADSGGDDDDDGGDGGGGEGLEEMTLEDFLTKAGAVREEDIRGVVPSVINEGSSSVEAFGNGNGIGASSASASVGKGKRRAVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVQQLEQENTRLINEELKEFLIPIEEKPKQKLRLQRTNSVQSL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3306g00007 246 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 218 IPR004827 GO:0003700|GO:0006355
Gabi3306g00007 246 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 174 225 - -
Gabi3306g00007 246 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 241 IPR043452 GO:0003700|GO:0045893
Gabi3306g00007 246 Gene3D - 174 226 - -
Gabi3306g00007 246 Pfam bZIP transcription factor 172 218 IPR004827 GO:0003700|GO:0006355
Gabi3306g00007 246 Coils Coil 198 218 - -
Gabi3306g00007 246 CDD bZIP_plant_BZIP46 175 215 - -
Gabi3306g00007 246 SMART brlzneu 171 233 IPR004827 GO:0003700|GO:0006355
Gabi3306g00007 246 MobiDBLite consensus disorder prediction 36 115 - -
Gabi3306g00007 246 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Gabi3306g00007 246 MobiDBLite consensus disorder prediction 146 170 - -
Gabi3306g00007 246 SUPERFAMILY Leucine zipper domain 175 218 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3306g00007 Gabi-Chr3306 66136 69575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3306g00007 7 234 bZIP Transcription Factor Family AT5G44080 36.996 1.25e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3306g00007 bZIP_1 1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3306g00007 K14432 - gmx:100101890 193.356