Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3306g00001 ATGGTTAATTTATGCAATGTTAAAGCCACAGATGGTGTAAAGCCTGTTCTGTTAATGATAGTGGTCCAGTCTCTATATGCAGTGGTGAATATCTTGTTCAAGTTGGCAGCAGATGATGGAATGAGCTTAAGTGTTCTTATTGCTTACCGCTTCATCTTTGCTGCTGGCTTCATTGTTCCCTTTGCTCTCATCTTTGAAAGGAAAAGCCTGCAACAACTTACTGGGAAAGTTCTATTCTATGCTCTTCTTTGTGGGTTATTTGGGGGATGCTTACAAAACAACCTCTATGTTAAATCTTTGGCCTTGGTAACTGCAACATATACTACAACCATGTTGAATCTCATCCCTGCTGTTACCTACATCTTGGCTGTTTCTCTTAGACTAGAGAAGCCAAATCTTGGAACAATAGATGGCAAGGCCAAGTTGCTGGGAACTATAACTGGAATTGGTGGAGCCATGATCCTCACTTTCTACAAAGGCAGAAGGATATCCTTCTGGTCAACACACATTGACTTGTTGCAACATGCGGCATCAAAACAGGAACCCCCAACTAGTACTCGCTTATGGGGCAGCATGCTAGCTTTGGGTGCTTCTATGAGTTACTCATTGTGGTTGATAATTCAGACAAAGATGAGTGAGAAATTTCGGTGGAACTATTCAATTGCTGCTTTGACATGCACAGCGAGCTCAATCCTATCTGTTATATTTGCTCTTTGCACGGAGAGAGATTGGAGCCAATGGAAACTTGGCTGGAACTTGAGGCTTCTAACAGCAGCTAGCTCGGGTATCTTGGCCTCTGGGGTGAATTATACCCTATTAGCATGGTGTGTGCGCATTAAGGGACCTCTTTTTGCTTCTGCTTTTAGTCCTCTAATGCTTGTGCTAGTGGCCTTGGGTGGATCATTAGTATTAGATGAGACACTTCATGTTGGAAGTTTAACAGGAGCAGTGTTGATTGTGTGTGGATTGTATGCGTTGTTGTGGGGTAAAAGAAACGAAACAAGGAAGGCGGAGAGTGAGTTGGTGTCCTTAAAAATTAGCTCTACTCAATGTGAACCAATCCAAATTGCCAAATCTTTCTCATGCAACCCAAGGGAGCATGACAAGAAGATTGTAGCAAGTGTTGCTACCAATACATCTTCTAGTGTCAACAATTCTATAGGCGAAGTTCAACAATTGAAAACTTGA 1188 0.4226 MVNLCNVKATDGVKPVLLMIVVQSLYAVVNILFKLAADDGMSLSVLIAYRFIFAAGFIVPFALIFERKSLQQLTGKVLFYALLCGLFGGCLQNNLYVKSLALVTATYTTTMLNLIPAVTYILAVSLRLEKPNLGTIDGKAKLLGTITGIGGAMILTFYKGRRISFWSTHIDLLQHAASKQEPPTSTRLWGSMLALGASMSYSLWLIIQTKMSEKFRWNYSIAALTCTASSILSVIFALCTERDWSQWKLGWNLRLLTAASSGILASGVNYTLLAWCVRIKGPLFASAFSPLMLVLVALGGSLVLDETLHVGSLTGAVLIVCGLYALLWGKRNETRKAESELVSLKISSTQCEPIQIAKSFSCNPREHDKKIVASVATNTSSSVNNSIGEVQQLKT 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3306g00001 395 PANTHER WAT1-RELATED PROTEIN 14 338 IPR030184 GO:0016020|GO:0022857
Gabi3306g00001 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 332 - -
Gabi3306g00001 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 160 - -
Gabi3306g00001 395 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020
Gabi3306g00001 395 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3306g00001 Gabi-Chr3306 8989 11056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3306g00001 13 375 Nodulin-like Gene Family AT1G25270 39.560 6.15e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3306g00001 - - aprc:113859960 534.643