Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3302g00052 ATGCCAACTGCTGAATCTTCATCAGGTTCCGGCCAAACCATATGTGTCACCGGCGCCGGTGGTTTCATCGCCTCTTGGATGGTCAAACTCCTCTTGGACAAAGGTTACACTGTCAGAGGAACCCTCAGAAACCCAGATGATCCTAAGAATGGGCACTTGAAAGAATTGGAAGGAGCTGCGGAGAGGCTAACACTGCATAAGGTTGATCTTCTTGATCTTCACTCTGTTCAATCAGCCATTCATGGCTGCCATGGTGTCTTTCACACCGCTTCTCCTGTCACTGATAACCCTGAGGAAATGGTGGAGCCAGCAGTGAATGGAGCAAAGAATGTAATAATAGCAGCTGCAGAAGCAAAAGTGCGACGTGTGGTCTTCACTTCATCAATTGGGGCTGTCTATATGGACCCAACTAGGAGTATGGATGTGGTGGTTGATGAGTCTTGTTGGAGTGATTTAGAATTTTGCAAGAACACCAAGAACTGGTATTGCTATGGGAAGGCTGTGGCTGAACAAGCCGCATGGGATGTAGCAAAAGAGAAAGGGGTGGACTTGGTTGTAGTGAACCCCGTTTTGGTTCTTGGGCCATTACTACAACTAGCCATGAATGCTAGCACAATTCACATTCTCAAGTACCTCACTGGTTCTGCTAAGACCTATACAAATGCTACGCAGGCTTATGTGGATGTTAGGGATGTTGCATTAGCCCACATTCTAGTTTATGAGAAGCCTTCTGCTTCTGGTCGATACTTGTGTGCCGAAAGTTCGTTGCACCGTGGAGAGCTAGTTGAAATTCTGGCCAAGTATTTCCCCGAGTACCCAATTCCTACCAAGTGTTCAGATGAAAAGAATCCAAGAGCAAAACCATACACCTTTTCAAATCAAAAGCTGAGAGATTTGGGATTGGAATTCACTCCAGTGAGTCAGTCTCTGTATGAAACCGTTAAGAGCCTGCAGGAGAAAGGCCACCTTCCTGTTCCTACAAAGCAAGAAGATTCTATTGCTGTGAAATCCTAA 1014 0.4596 MPTAESSSGSGQTICVTGAGGFIASWMVKLLLDKGYTVRGTLRNPDDPKNGHLKELEGAAERLTLHKVDLLDLHSVQSAIHGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPTRSMDVVVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWDVAKEKGVDLVVVNPVLVLGPLLQLAMNASTIHILKYLTGSAKTYTNATQAYVDVRDVALAHILVYEKPSASGRYLCAESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRAKPYTFSNQKLRDLGLEFTPVSQSLYETVKSLQEKGHLPVPTKQEDSIAVKS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3302g00052 337 CDD FR_SDR_e 15 301 - -
Gabi3302g00052 337 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Gabi3302g00052 337 Gene3D - 3 337 - -
Gabi3302g00052 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 314 - -
Gabi3302g00052 337 FunFam Cinnamoyl-CoA reductase 1 5 336 - -
Gabi3302g00052 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3302g00052 Gabi-Chr3302 499683 503493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3302g00052 11 277 Monolignol Biosynthesis Gene Families AT1G80820 75.281 4.13e-146 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3302g00052 K09753 - gmx:100796771 592.808