Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3302g00051 ATGCCAACTGCTGAATCTTCATCAGGTTCCGGCCAAACCATATGTGTCACCGGCGCCGGTGGTTTCATCGCCTCTTGGATGGTCAAACTCCTCTTGGACAAAGGTTACACTGTCAGAGGAACCCTCAGAAACCCAGATGATCCTAAGAATGGGCACTTGAAAGAATTGGAAGGAGCTGCGGAGAGGCTAACACTGCATAAGGTTGATCTTCTTGATCTTCACTCTGTTCAATCAGCCATTCATGGCTGCCATGGTGTCTTTCACACCGCTTCTCCTGTCACTGATAACCCTGAAATGGTGGAGCCAGCAGTGAATGGAGCAAAGAATGTAATAATAGCAGCTGCAGAAGCAAAAGTGCGACGTGTGGTCTTCACTTCATCAATTGGGGCTGTCTATATGGACCCAACTAGGAGTATGGATGTGGTGGTTGATGAGTCTTGTTGGAGTGATTTAGAATTTTGCAAGAACACCAAGAACTGGTATTGCTATGGGAAGGCTGTGGCTGAACAAGCCGCATGGGATGTAGCAAAAGAGAAAGGGGTGGACTTGGTTGTAGTGAACCCCGTTTTGGTTCTTGGGCCATTACTACAACTAGCCATGAATGCTAGCACAATTCACATTCTCAAGTACCTCACTGGTTCTGCTAAGACCTATACAAATGCTACGCAGGCTTATGTGGATGTTAGGGATGTTGCATTAGCCCACATTCTAGTTTATGAGAAGCCTTCTGCTTCTGGTCGATACTTGTGTGCCGAAAGTTCGTTGCACCGTGGAGAGCTAGTTGAAATTCTGGCCAAGTATTTCCCCGAGTACCCAATTCCTACCAAGTGTTCAGATGAAAAGAATCCAAGAGCAAAACCATACACCTTTTCAAATCAAAAGCTGAGAGATTTGGGATTGGAATTCACTCCAGTGAGTCAGTCTCTGTATGAAACCGTTAAGAGCCTGCAGGAGAAAGGCCACCTTCCTGTTCCTACAAAGCAAGAAGATTCTATTGCTGTGAAATCCTAA 1011 0.459 MPTAESSSGSGQTICVTGAGGFIASWMVKLLLDKGYTVRGTLRNPDDPKNGHLKELEGAAERLTLHKVDLLDLHSVQSAIHGCHGVFHTASPVTDNPEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPTRSMDVVVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWDVAKEKGVDLVVVNPVLVLGPLLQLAMNASTIHILKYLTGSAKTYTNATQAYVDVRDVALAHILVYEKPSASGRYLCAESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRAKPYTFSNQKLRDLGLEFTPVSQSLYETVKSLQEKGHLPVPTKQEDSIAVKS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3302g00051 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 313 - -
Gabi3302g00051 336 Pfam NAD dependent epimerase/dehydratase family 14 244 IPR001509 -
Gabi3302g00051 336 Gene3D - 3 336 - -
Gabi3302g00051 336 FunFam Cinnamoyl-CoA reductase 1 5 335 - -
Gabi3302g00051 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 317 IPR036291 -
Gabi3302g00051 336 CDD FR_SDR_e 15 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3302g00051 Gabi-Chr3302 499683 503493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3302g00051 11 276 Monolignol Biosynthesis Gene Families AT1G80820 75.281 1.79e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3302g00051 K09753 - gmx:100796771 586.26