Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3302g00047 ATGGATTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCCTACAGAGTTCATGAAGAATTTCCAAAAAAGGTGGAAAACAATTTTTTCTCATTGGGGATGAGGAAGTCTTCTGTAAAAGAAGAGTCCTCTGGTGCCTTGGTGGAGGAGCTAAAGCGGGTGAGTGCAGAAAACAAGAAGTTGACCGAAATGCTCACAGAGATGTGTGAGAATTATAACACTTTGCGAAGCAACTTGATGGAATATATGAGGAAGAATCCTGAGAAGGAGCTTAGTTCATCGAAGAAAAGGAAGTCCGAAGGCAGCAACAACAATAGTAATCAAATGGGAGTTAATGGAAACTCTGAGAGCAGCTCAACTGATGAAGAGTCATGCAAGAAACCGAGGGAAGACACAATCAAAGCAAAAATTTCCAGAGTTCATTTCAGGACCGAAGCATCTGATACCAGCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGGCAAAAAGTGACCAGGGATAACCCTTCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGCCCAGTAAAAAAGAAGGTGCAAAGAAGTGTTGATGATCAATCTGTTTTGGTTGCAACTTATGAAGGAGAGCATAATCATCCCCACCCTTCTCAAATGGAAGCAACATCAGGCTCCAACCATGGTATGACCATAGGTTCAGTACCTTGTTCAGCGTCTCTTAACACTTCCGCACCAACAGTTACCCTTGACTGGACAAAATCTAAGTCCAGCAACGATGTTGTCAAGAAAAAAGATCCCAAAATTGAGTCACCGGAAGTCCCGCAGATTTTGGTGGAACAGATGGCTACTTCCTTAACCAAGGATCCCAATTTCAGAGCAGCACTTGTTGCCGCTATCTCAGGAAGAATGTTGCACAATAATTAA 927 0.4218 MDCSSWINTSLDLNINPYRVHEEFPKKVENNFFSLGMRKSSVKEESSGALVEELKRVSAENKKLTEMLTEMCENYNTLRSNLMEYMRKNPEKELSSSKKRKSEGSNNNSNQMGVNGNSESSSTDEESCKKPREDTIKAKISRVHFRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPHPSQMEATSGSNHGMTIGSVPCSASLNTSAPTVTLDWTKSKSSNDVVKKKDPKIESPEVPQILVEQMATSLTKDPNFRAALVAAISGRMLHNN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3302g00047 308 MobiDBLite consensus disorder prediction 101 122 - -
Gabi3302g00047 308 Pfam WRKY DNA -binding domain 157 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3302g00047 308 SMART WRKY_cls 156 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3302g00047 308 Gene3D WRKY domain 140 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3302g00047 308 FunFam WRKY transcription factor 40 141 218 - -
Gabi3302g00047 308 ProSiteProfiles WRKY domain profile. 151 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3302g00047 308 SUPERFAMILY WRKY DNA-binding domain 153 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3302g00047 308 MobiDBLite consensus disorder prediction 89 133 - -
Gabi3302g00047 308 Coils Coil 54 74 - -
Gabi3302g00047 308 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 40 304 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3302g00047 Gabi-Chr3302 437932 439845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3302g00047 4 308 WRKY Transcription Factor Family AT1G80840 53.481 1.36e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3302g00047 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3302g00047 - - gmx:100798375 480.33