Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3302g00028 ATGTTCTTGTCCTCCTCCCCACAACATATCTGTGCCATCTTGCTCCTCGTATCTGTCGTCGCCACTACTGTAACCGCCACCGACCACATTGTGGGTGCAAATCGTGGTTGGAACCCTGGTTTCAACTACACTCTCTGGGCCAACAACCAAACTTTCTATGTCGGAGATCTCATCTCATTTAGGTACCTGAAGAACCAGTACAATGTGTTTGAGGTGAACCAAACTGGTTATGACAACTGCACCACAGAAGGGGCTTTTGGGAATTGGAGTAGCGGCAAAGATTTCATACCTCTGAATAAGGCCAGGAGGTATTACTTTATTTGTGGCAATGGCCAATGCTTCAATGGGATGAAGGTCTCTGTTCTTGTCCATCCTCTCCCTTCTCCTCATACTTCTGTTAACCATTCAACGCCAAATTCTGCTGCTCCGGTGGTCTTGGAATGGGGGCTACCATCTCTAGTGTTGTCTTCTGCTTTAGTTTGGTTTGGTTGGATGTAG 498 0.4699 MFLSSSPQHICAILLLVSVVATTVTATDHIVGANRGWNPGFNYTLWANNQTFYVGDLISFRYLKNQYNVFEVNQTGYDNCTTEGAFGNWSSGKDFIPLNKARRYYFICGNGQCFNGMKVSVLVHPLPSPHTSVNHSTPNSAAPVVLEWGLPSLVLSSALVWFGWM 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3302g00028 165 ProSiteProfiles Phytocyanin domain profile. 27 125 IPR003245 GO:0009055
Gabi3302g00028 165 SUPERFAMILY Cupredoxins 26 124 IPR008972 -
Gabi3302g00028 165 Gene3D - 25 127 IPR008972 -
Gabi3302g00028 165 FunFam Lamin-like protein 25 126 - -
Gabi3302g00028 165 Pfam Plastocyanin-like domain 37 117 IPR003245 GO:0009055
Gabi3302g00028 165 PANTHER BLUE COPPER PROTEIN 25 131 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3302g00028 Gabi-Chr3302 305633 306522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3302g00028 10 132 Phytocyanin Superfamily AT5G15350 41.732 7.94e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3302g00028 - - qsa:O6P43_017932 259.996