Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3302g00013 ATGGAGCAAGTTTGTCTCAACAGTGAGCCAGTAGAAGATGAGGATGATGAATTTGAGATTGAAGAAGAAGGGGACTGTGAAAGTGAATTTGTCATTCAAAATGGGATCATTCAAGGACAGAACCCTCTTCCTCCTGCTGTTGGAATGGAATTTGAGACTTATGAGGATGTTTATTACTTCTATAATTGCTATGCTAAGGAACAGGGATTTGGGGTTAGAGTAACTAATACCTGGTACCGCAAGAGTAAGGAACGTTACAGAGCAAAACTTAGCTGCAGCAGTGCAGGCTTCAAGAAAAGAAGTGAAGCAAATCGCCCCAGACCTGAAACCAGAACTGGTTGTCCTGCTATGATCAAGTTCAGATTGATGGACTCCAAAAGGTGGAGAATTATAGAAGTTGAGCTTGACCACAATCACTTGATTAACCCCACCAGTGGAAAGTTTTATAAGTCACATAAGCAAGTTGCTCTTGGGAACAAAAGAACATTGCAATTAGATGGTGCTGAACAAGTTCAGAAAATTAGGATGTTTCAAACTGTGATAGTTGATGCTGAGGCTGATGTAAGTGTCGATGTTGATCAAGGGAAATCCGAAAAAAATCTTTACACCAATCAATTGAAGCTAAGGAAAGGTGATGCTGAAGCGATTCTGAATTTTTGTAGTCACTTGCAATTGGCAGATCCAAACTTCTTCTATGTGGCGGATATCAATGAGAGGGGATGCTTGAGGAATTTGTTCTGGGCCGATGCAAAGTCCAGAGTAGCATACAGTTATTTTAGTGATGTGGTCACAATTGATACTACATGTTTGACAGGTGAATATCAAGTTCCCCTGGTTCTGTTCCTTGGATTAAACCACCATAAACAATGCATTTTGTTTGGTTGTGGATTGCTTGCTGGTGATACCATTGATTCATATACATGGCTTTTCAGGGCATGGCTTACATGTATCTTAGGACGCCCCCCACAAGTTATCATTACCAACCAATGTGGAATCTTGCAAACTGTGGTTGCTGATGTTTTTCCAAGAAGTACACACTGTTTTTGCTTATTTAATATCATGCAAAATATTCCAGAAAAACTGGGAACATCTCCAGAATATGAAGCAATCCATGCAGATCTGAAGAGAGCAGTTTATTCCTCTCTGGGGGCTCAGGAATTTGAAGCAAATTGGGAGGACATGATGAAAAGCAATGAAATTAGAGGCCATAAATGGCTTCAATCATTGTATGAAGATCGGAAACGGTGGGTTCCAGTTTATCTGAAGGAAAATTTCTTGGCAGGCATGTTTCCAATTCAACCAAGTGATGTTGTATCATTTTTCTTTGACGGGTACCTTTATGAACAAACTTCCCTTAAAGAATTTTTGGAAAGATATGATCAGGCTTTACAGACAAAGCGACAACTTGACGCTTTGGCAGATTTGGACTCAAAAACTTCTAGCTTTATGCCAAAGTCAAGGTCTAATTTTGAGTTGCAGGTTTCGAAGTTATACACCAATGAAATATTAAGAATGTTCGAAAGGGAAGTGGAAGGAATGTACTCTTGCTTTAGCACCAGACAGATAAATGTTGATGGGCCATTAATCACATACATTGTGAAGGAACAAGTTGAAATTGAGGGAAATCAGAGAGATACAAGAGATTATGAGGTGTATTACAATGGAGATGAAATGGAGGTCCTTTGCATTTGTGGCTTGTTCAATTTCAGAGGATTCTTGTGTAGGCATGCTTTATTTATCTTAAGCCAAAATGGCATAAAAGAGATACCACCTCAGTACATTCTTTCACGATGGAGAAAAGATATGAAGCGTACCAATGTTTATGATCACAATTGCAGTGGCATTGATGTTAATAGCCCAGTACATAGGTATGACCATTTATACAGACAGATTGTGAAGGTCGTGGAGGAAGGTAAGAAATCCCATGACCATTACAGGACTACAGTACAAGCATTGGAGAACGTATTGAACAAACTTCATCTTGTAAATGTAGAAGATCTCCCAATTTAG 2010 0.3925 MEQVCLNSEPVEDEDDEFEIEEEGDCESEFVIQNGIIQGQNPLPPAVGMEFETYEDVYYFYNCYAKEQGFGVRVTNTWYRKSKERYRAKLSCSSAGFKKRSEANRPRPETRTGCPAMIKFRLMDSKRWRIIEVELDHNHLINPTSGKFYKSHKQVALGNKRTLQLDGAEQVQKIRMFQTVIVDAEADVSVDVDQGKSEKNLYTNQLKLRKGDAEAILNFCSHLQLADPNFFYVADINERGCLRNLFWADAKSRVAYSYFSDVVTIDTTCLTGEYQVPLVLFLGLNHHKQCILFGCGLLAGDTIDSYTWLFRAWLTCILGRPPQVIITNQCGILQTVVADVFPRSTHCFCLFNIMQNIPEKLGTSPEYEAIHADLKRAVYSSLGAQEFEANWEDMMKSNEIRGHKWLQSLYEDRKRWVPVYLKENFLAGMFPIQPSDVVSFFFDGYLYEQTSLKEFLERYDQALQTKRQLDALADLDSKTSSFMPKSRSNFELQVSKLYTNEILRMFEREVEGMYSCFSTRQINVDGPLITYIVKEQVEIEGNQRDTRDYEVYYNGDEMEVLCICGLFNFRGFLCRHALFILSQNGIKEIPPQYILSRWRKDMKRTNVYDHNCSGIDVNSPVHRYDHLYRQIVKVVEEGKKSHDHYRTTVQALENVLNKLHLVNVEDLPI 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3302g00013 669 Coils Coil 452 472 - -
Gabi3302g00013 669 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 660 IPR031052 GO:0006355
Gabi3302g00013 669 Pfam MULE transposase domain 262 356 IPR018289 -
Gabi3302g00013 669 SMART 26again6 560 587 IPR006564 GO:0008270
Gabi3302g00013 669 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Gabi3302g00013 669 Pfam FAR1 DNA-binding domain 60 142 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3302g00013 Gabi-Chr3302 138677 140981 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3302g00013 MULE 5.7e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3302g00013 - K17604 gmx:100796267 1061.6