Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3302g00008 ATGAAGATGCATGCTTTGATGGACTCAACAACTGCAGTGTTGCTGATCTTTCTTTCAGTTTCAGTGTATTCTCATGGCACTGTTATCGTATCCAAGGATGGGAATGGAGATTACACAACTGTGAGTGAGGCTATTACGAAAGCTCCGGATTTGAGTGACAAACCTTACACCATTCACGTTCGAGCAGGTACTTATGAAGAGTACATCGTCATTCCTGCTGAGAAGACTAATATCAAGCTCGTTGGAGATGGTCCTCACCACACGAAAATAGTTAGCTACCAAAATGGTTCCACCATAGATATTTATGGAGACGAGTTCGTGGCCCAAAACATGGGATTTGTGAACTACGCAGGGCTAAACGCAAGTGCTGCAGTGACAGTTCGCAACGAGGCAAACAATAGCGTATTCTACGAATGCTCCATCGAAGGATTCCAAGACACATTATGGGCGGTTTCGGGGCGACAGTTCTACAAGAAGTGCGACATTTATGGGACGGTGGACTTCATATACGGCGACGCAGCGGCAGTGTTTCAAGACTGCATGGTATACGCACGTTATAGAGAGCACGTGACGTTCACAGCTCAGTCACGAGAGGATGGTAATGAGAAAACAGGGTTCACATTCCAAAGATGCAAATTCACAATGTCCCCAGAGGCAGAGGACTCTGATAGAAAGTTGGAGGTGCATGCCACGTTGGGGCGTCCGTGGAGGGCCTACTCGACAGTGGCCATCATACAGTGTTATATCGACTCGATTGTGGATCCTAAAGGTTGGGAGGAGATGCCGGGCCAGCCCACGGATAAGGTTACGTACGTGGAGTTTGAGAATGTTGGGCCTGGTTCTAACACTGATGAAAGAGTTAAGTGGCCCGGTGTTAGAGTCCTTCTCGACCCAATGGATGTTGCACCTTTCACTGCTTCCTATCTATTGGATGCTGACTCTTGGATTCCTTCCAAAGGTGTTCCCTATGATAATGGACTCTAG 984 0.4746 MKMHALMDSTTAVLLIFLSVSVYSHGTVIVSKDGNGDYTTVSEAITKAPDLSDKPYTIHVRAGTYEEYIVIPAEKTNIKLVGDGPHHTKIVSYQNGSTIDIYGDEFVAQNMGFVNYAGLNASAAVTVRNEANNSVFYECSIEGFQDTLWAVSGRQFYKKCDIYGTVDFIYGDAAAVFQDCMVYARYREHVTFTAQSREDGNEKTGFTFQRCKFTMSPEAEDSDRKLEVHATLGRPWRAYSTVAIIQCYIDSIVDPKGWEEMPGQPTDKVTYVEFENVGPGSNTDERVKWPGVRVLLDPMDVAPFTASYLLDADSWIPSKGVPYDNGL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3302g00008 327 Pfam Pectinesterase 28 312 IPR000070 GO:0030599|GO:0042545
Gabi3302g00008 327 SUPERFAMILY Pectin lyase-like 22 325 IPR011050 -
Gabi3302g00008 327 Gene3D - 23 327 IPR012334 -
Gabi3302g00008 327 PANTHER PECTINESTERASE 27 317 - -
Gabi3302g00008 327 FunFam Pectinesterase 25 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3302g00008 Gabi-Chr3302 83695 87579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3302g00008 28 327 Carbohydrate Esterase AT1G11590 41.214 4.96e-77 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3302g00008 K01051 - gmx:102665195 499.204