Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3302g00007 ATGGCTCTTGAGACCTCTCAGTCTCAGCAACATGATGAATTCATTTTCAGGTCGAAGCTTCCCGATATCTACATCCCCAAACACCTTCCCCTTCACTCTTATTGCTTTGAGAATCTTTCCGAGTTTGGATCACGGCCTTGTCTTATCAATGCCCCAACCGGTGTGGTCTTCACCTACCACGACGTAGAACTCACCGCACGTAAAGTTGCCTCAGGTCTCATCAAATTGGGAATTCAACAAGGTGAAGTGATCATGATTCTGCTTCCCAATTCCCCTGAATTTGTGTTCACCTTTCTCGGCGCTTCTTATCGCGGTGCCATGGCAACCGCTGCTAACCCATTCTTCACAGCATCTGAGATTGCAAAGCAAGCAAAGGCTTCCAATGCCAAGTTGCTCATAACCCAATCCAGTTACTACGAGAAAGTTAAGGACTTGGATGTGAAGGTTGTGATGGTGGACTCTCCCCAAGAAGAAGGGTGTATGCATTTCTCAGAATTGAGCGACGCGGACGAGAATGAATTGGAATTAGCAGAGGTTAAGATAAAAGGTGATGATGCGGTGGCATTGCCGTATTCGTCGGGGACGACAGGTATGCCGAAAGGGGTGATGTTAACACACAAAGGTTTAGTTACGAGCATAGGACAACAAGTGGATGGGGACAATCCAAACCTCTATTACAACTCCGAGGATGTTATATTGTGTGTTCTTCCACTCTTTCATATATACTCTCTCAACTCTGTTTTACTATGCGGTTTGAGAGCAAAGGCTGCTATTCTCCTCATGCCTAAGTTCGACGTTAATGCATTGCTCTCTCTCGTTCAGAAACACAAAATCACTATTGCCCCTGTCGTTCCTCCTATTGTTTTGGCCATTGCTAAGTCACCCGATCTTTCTAACTATGACCTTTCTTCGATTCGGGTGTTGAAATCTGGTGGAGCTCCTCTCGGTAAAGAACTCGAAGACACTCTCAGGGCCAAATTCCCTAACGCCAGACTTGGACAGGGATATGGAATGACAGAGGCAGGACCAGTGCTAACAATGAGCTTAGCATTTGCTAAAGAACCGATGGATGTAAAACCAGGTGCATGTGGAACAGTTGTGAGAAATGCAGAGATGAAGATTGTGGATCCTGAAACTGGTCATTCTTTGCCTCGAAACCAATCCGGTGAAATTTGCATAAGAGGCGACCAGATCATGAAAGGTTATCTAAATGATGAAGAGGCTACGGAGAGAACCATAGACAAAGAGGGTTGGTTGCATACAGGTGACATAGGTTACATCGACGATGACGATGAGTTATTCATCGTTGATAGGCTGAAGGAATTGATCAAATACAAAGGATTTCAGGTTGCTCCAGCTGAACTTGAAGCCCTTCTTCTCACCCATCCTAAGATTTCTGATGCTGCTGTCGTTCCAATGAAGGATGAAGCGGCTGGAGAGGTACCTGTTGCATTTGTAGTGAGATCAAACGGTTACACAGACACAACCGAGGATGAGATTAAACAGTTTATCTCCAAACAGGTTTCAGGTGGTGTTTTACAAAAGAATAAACCGAGTATTCTTCATTGA 1569 0.4493 MALETSQSQQHDEFIFRSKLPDIYIPKHLPLHSYCFENLSEFGSRPCLINAPTGVVFTYHDVELTARKVASGLIKLGIQQGEVIMILLPNSPEFVFTFLGASYRGAMATAANPFFTASEIAKQAKASNAKLLITQSSYYEKVKDLDVKVVMVDSPQEEGCMHFSELSDADENELELAEVKIKGDDAVALPYSSGTTGMPKGVMLTHKGLVTSIGQQVDGDNPNLYYNSEDVILCVLPLFHIYSLNSVLLCGLRAKAAILLMPKFDVNALLSLVQKHKITIAPVVPPIVLAIAKSPDLSNYDLSSIRVLKSGGAPLGKELEDTLRAKFPNARLGQGYGMTEAGPVLTMSLAFAKEPMDVKPGACGTVVRNAEMKIVDPETGHSLPRNQSGEICIRGDQIMKGYLNDEEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPKISDAAVVPMKDEAAGEVPVAFVVRSNGYTDTTEDEIKQFISKQVSGGVLQKNKPSILH 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3302g00007 522 Pfam AMP-binding enzyme C-terminal domain 454 508 IPR025110 -
Gabi3302g00007 522 SUPERFAMILY Acetyl-CoA synthetase-like 13 509 - -
Gabi3302g00007 522 Gene3D - 440 515 IPR045851 -
Gabi3302g00007 522 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 440 - -
Gabi3302g00007 522 CDD 4CL 25 509 - -
Gabi3302g00007 522 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 509 - -
Gabi3302g00007 522 Gene3D - 8 439 IPR042099 -
Gabi3302g00007 522 Pfam AMP-binding enzyme 40 445 IPR000873 -
Gabi3302g00007 522 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3302g00007 Gabi-Chr3302 76040 81861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3302g00007 3 522 Monolignol Biosynthesis Gene Families AT1G51680 68.053 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3302g00007 K01904 - gmx:547944 830.476