Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3302g00005 ATGGGTTCTGTAGAGAAGAAGATGGACCTTGATTTTGATGAGGAGATTCCCTTCAGCTCTTCACCATCTACGTCTAAAGTTCGTACTTTGAATTTTGAGAGAACGGTTGATTTGCCCAAATCGTCTTTCTTTAACATTTTACGAGCACGGTGTATCAGCAGAAGCATATATGTTGTCTTAATTAAAGCCAAGATCAACATGTTGCTACCATTTGGTCCACTCGCCATATTGCTACATTATCTAACGGGAAAGCATGGATGGGTGTTTTTCTTCACCTTATTGGGTATTACTCCTTTGGCAGAACGTCTGGGTTATGCTACCGAGCAGCTTGCGTTCTACACAGGACCAACAGTTGGGGGTCTGCTTAATGCCACATTTGGCAATGCAACTGAAATGATCATATCAATTTATGCACTGAAAAGTGGTATGATTAGGGTTGTTCAGCAATCTTTACTTGGCTCAATCTTGTCAAACATGCTTCTAGTTCTTGGGTGTGCATTCTTTACTGGTGGGGTTGTCCACAGCCAAAAAGATCAGGTTTTTGATAAGGCAGCTGCTGTTGTTAATTCTGGGTTGCTGTTGATGGCTGTAATGGGAATTCTATTTCCTGCTGTGCTTCACTTTACTCACTCAGAGGTTCATCTTGGGAAGTCAGTGTTATCTCTATCAAGATTTAGCAGCTGTGTAATGCTAGTGGCATATGCATGCTACATTTTCTTTCAACTTAGAAATCAACAGACTTCTTATAGTCCAGTTGACGAGGAAGGAGATAATAGTGAAAATTCCGACAAGGAGGAAGAAGAACTTGAATTAAGTCAATGGGAAGCAATAATCTGGCTTGCTATTTTGACAGCATGGGTATCTGTGTTGTCTGGATACCTTGTGGATGCCATAGAGGGAGCATCTGAGTCATTGAATATGTCAATGGCTTTTATTAGTGTCATCTTGCTTCCAATTGTAAGCAATGCTGCAGAGCATGCAAGTGCTATCATGTTTGCCATTAAGGACAAGCTTGATATCACTATTGGAGTTGCTGTTGGATCATCTACACAAATATCTATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGTTGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTCGAGACTGCCACACTTTTTATCACTGTGCTAGTAGTTGCTTTTATGATGCAGGAAGGAACCTCAAATTATTTTAAGGGCTTGATGCTTATTCTATGCTATCTTATAGTTGCTGCCAGTTTTTTTGTACATGTAGATCCTAAAAGTGGTGATGACTAA 1290 0.4023 MGSVEKKMDLDFDEEIPFSSSPSTSKVRTLNFERTVDLPKSSFFNILRARCISRSIYVVLIKAKINMLLPFGPLAILLHYLTGKHGWVFFFTLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKSGMIRVVQQSLLGSILSNMLLVLGCAFFTGGVVHSQKDQVFDKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCVMLVAYACYIFFQLRNQQTSYSPVDEEGDNSENSDKEEEELELSQWEAIIWLAILTAWVSVLSGYLVDAIEGASESLNMSMAFISVILLPIVSNAAEHASAIMFAIKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSGDD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3302g00005 429 FunFam Vacuolar cation/proton exchanger 264 420 - -
Gabi3302g00005 429 NCBIfam calcium/proton exchanger 58 419 - -
Gabi3302g00005 429 Gene3D - 116 253 IPR044880 -
Gabi3302g00005 429 Gene3D - 264 420 IPR044880 -
Gabi3302g00005 429 Pfam Sodium/calcium exchanger protein 277 416 IPR004837 GO:0016020|GO:0055085
Gabi3302g00005 429 Pfam Sodium/calcium exchanger protein 87 242 IPR004837 GO:0016020|GO:0055085
Gabi3302g00005 429 FunFam Vacuolar cation/proton exchanger 116 255 - -
Gabi3302g00005 429 NCBIfam calcium/proton exchanger 68 419 IPR004798 GO:0006816|GO:0015369
Gabi3302g00005 429 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 35 424 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3302g00005 Gabi-Chr3302 65742 73762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3302g00005 33 424 Antiporters AT3G13320 73.724 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3302g00005 K07300 - gmx:100806000 673.315