Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3301g00020 ATGGTTATCTCTGATGAGAACAAGTCCAACTCCGTCTTGCCCAGGAATTTCGAAGGAGGGTTGGATAATATGGTTACCAGAAAGGTTGGGCAGAATAGAAGAGCATTGAGCGGCATCAATCAGAATCTAGTGCAAGGCGGATTGTTACCTTGCGTTGTTAGCAAGAGGGTGTTGTCTGAAAAACATGGGACTTTTGAAAAGAAGCCAGCGGATCCAGTGCATCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTAGCTCACAGCAATCTTGCGCCGAGGAAACTAAGAAGTCAAACCCGTCAATGTCAAATCTGAATGTGATTGGAAACTCTATTTCCTTGGATGATGCACACAAGTTACCAGAAGACCAACCAGTGCCCATGTCTTTAGAGCAAACAGAACCACCAATGCACAGTGATTCAGATGAGATGGAAGAAGTAGAGATGGAGGATATAGTTGAAGAGCCTCTTATGGACATTGATAGCTGTGATGCAAATAATCCTCTTGCAATAGTGGAATATATTGAAGATCTTCATACTAACTACAGAAAATTTGAGGGTATTAGCTGTGTCTCCCAAAATTATATGGCACAACAACTTGACATCAATGAAAGGATGAGGGCTATACTAATCGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCAAGAGACATTGTTTCTTACAATTAATATCATAGACAGATTTTTGGCAAAACAAACAGTGGAAAGAAAGAAGCTTCAGTTGGTTGGTCTGGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCCGTGCCTGTGGTTGGTGATCTAATCCATATATCAGACAGAGCTTACACAAGGAAGGAAGTTCTTAACATGGAAAAGTTTGTGCTGAATACATTGCAGTTTAACATGTCTGTACCAACAGTATATGTTTTCATGAGAAGGTTTCTAAAGGCAATTCAAGCAGACAAAAAACTTGAGTTACTAGCTTTCTTTTTGGTAGAGCTATCTCTGGTAGAATATGAGATGGTGAAGTTCCCCCCATCTTTGATAGCTGCAGCTGCAGTCTACACAGCTCAATGCACATTCAATGGTTTCAAAGAGTGGAGTAAGACATGTGAATGGCATACAAAATACTCAGAAGATCAGCTATTAGAGTGCTCTACTGAAATGGTTGCGTTACACCAGAAGGCTGGGATAGGAAAACTCACTGGGGTACATAGGAAGTATTGCTCATCTAAATATGGCTATACTGCAAAACATGAACCAGCATGTTTTCTTCTGAAGAACTAA 1290 0.4101 MVISDENKSNSVLPRNFEGGLDNMVTRKVGQNRRALSGINQNLVQGGLLPCVVSKRVLSEKHGTFEKKPADPVHRPITRRFAAQIASSQQSCAEETKKSNPSMSNLNVIGNSISLDDAHKLPEDQPVPMSLEQTEPPMHSDSDEMEEVEMEDIVEEPLMDIDSCDANNPLAIVEYIEDLHTNYRKFEGISCVSQNYMAQQLDINERMRAILIDWLIEVHDKFDLMQETLFLTINIIDRFLAKQTVERKKLQLVGLVAMLLACKYEEVSVPVVGDLIHISDRAYTRKEVLNMEKFVLNTLQFNMSVPTVYVFMRRFLKAIQADKKLELLAFFLVELSLVEYEMVKFPPSLIAAAAVYTAQCTFNGFKEWSKTCEWHTKYSEDQLLECSTEMVALHQKAGIGKLTGVHRKYCSSKYGYTAKHEPACFLLKN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3301g00020 429 MobiDBLite consensus disorder prediction 87 112 - -
Gabi3301g00020 429 CDD CYCLIN_AtCycB-like_rpt2 306 422 - -
Gabi3301g00020 429 SMART Cyclin_C_2 306 423 IPR004367 -
Gabi3301g00020 429 Gene3D - 178 418 - -
Gabi3301g00020 429 PIRSF Cyclin_A_B_D_E 5 429 IPR046965 GO:0016538|GO:0044772
Gabi3301g00020 429 PANTHER CYCLINS 135 396 IPR039361 -
Gabi3301g00020 429 CDD CYCLIN_AtCycB-like_rpt1 155 301 - -
Gabi3301g00020 429 SUPERFAMILY Cyclin-like 305 422 IPR036915 -
Gabi3301g00020 429 SMART cyclin_7 310 392 IPR013763 -
Gabi3301g00020 429 SMART cyclin_7 213 297 IPR013763 -
Gabi3301g00020 429 FunFam G2/mitotic-specific cyclin-1 291 418 - -
Gabi3301g00020 429 ProSitePatterns Cyclins signature. 208 239 IPR006671 -
Gabi3301g00020 429 Pfam Cyclin, C-terminal domain 306 422 IPR004367 -
Gabi3301g00020 429 SUPERFAMILY Cyclin-like 167 303 IPR036915 -
Gabi3301g00020 429 Pfam Cyclin, N-terminal domain 180 304 IPR006671 -
Gabi3301g00020 429 MobiDBLite consensus disorder prediction 87 142 - -
Gabi3301g00020 429 Gene3D - 192 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3301g00020 Gabi-Chr3301 479956 484295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3301g00020 1 427 Core Cell Cycle Gene Families AT1G20610 57.044 3.74e-170 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3301g00020 K21777 - gmx:100779889 612.068