Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3293g00057 ATGGGAGATAAGATATATCACAATCCAGAAACTACTAAAAGGTATCACCACAAAATGTTATCATCACTCTTAGGGAGCAAAGAAGCTGCAAAGAATTCAATTCTTTACAGCTATAAGCACGGATTTTCAGGGTTTGCTGCAAGATTGACAAAATCTCAAGCAGAAGAAATAGAAATGTTTCCTGGAGTAGTTTCTATCTTTCCAAACCGAATTCACAAACTCCACACAACCAGAAGCTGGGACTTTATTGGGGTCCATCATTCCTCCTCAAAAACAGCTTTCACTGAAAGCAACTTAGGTGAAGGAACCATCATTGGAGTCATAGACACAGGCATTTGGCCAGAATCTGCAAGTTTCAATGATGAAGCAATGGGACAAATCCCATCAAGGTGGAAAGGAGTTTGTCAAGTGGGAGAACACTTCAACTCCACCAATTGCAACAAGAAGATAATAGGTGCTAGATGGTTCTTGAAAGGAATAACTGATCAGACTAAGAAGCTCATCAATGGAAATGACACAAAGGAGTTTCTCTCAGCCCGAGATGCTATTGGCCATGGCACTCATACAGCTTCCACAGCAGCTGGTTATTTTGTAGGAAAAGCAAATTTTAGAGGACTTGCTTCTGGTTTAGCTAGAGGAGGAGCACCCCTTGCTCACTTAGCTATCTACAAGGCTTGTTGGGACATTTCTATTGGAGATTGTAGTGATGCTGATATCCTTAAAGCTTTTGACAAGGCTATACATGATGGAGTAGATGTTTTAACTGTTTCTCTTGGCATTGGCATTCCTTTGTTCTCATATGTTGATCAACGTGACACAATAGCAATTGGTTCCTTTCATGCAACTTCCAAGGGAATCACTGTTATATGTTCAGCTGGAAATTCTGGCCCCATGTCTCAAACCATTACAAATACTGCACCTTGGCTCATTACAGTTGCAGCTACCACAATAGATAGGACCTTTCCAGCAGCCATCACCCTTGGAAATAACCACACTGTGTGGGGACAGTCTATTGATACTGTGAAACACAATCTTGGATATGTTGGTCTCACATACTCAGAACGCATTGCTCTAGACCAATCAGATGATTTAGCCAAGGATTGTCAGTCTGGAAGTCTGAATGCAACAATGGCAGCAGGCAAAATTGTTCTATGCTTTTCCCTATCAGATCAACAGGATATTGTTTCTGCATCACTTACAGTAAAGAAAGCCGGAGGAGTTGGACTAATATATGCACAATTTCATGAAGATGGACTCGGTCAATGTGATTTGTTTCCATGTATTAAGGTGGATTATGAAGTGGGAACACAAATATTATCCTACATTAGAAGAGCAAGGTTTCCAACTGCAAGCCTAAGTTTTCCAAAGACTGTTATTGGAAAATGGATATCTCCACGAGTTGCATCTTTCTCATCTAGAGGACCCAGTAGCATGTCTCCAACTGTGCTGAAGCCTGATATAGCAGCACCAGGTGTGGACATTTTGGCTGCATTTCCACCAGAGGGAACTGCAAAGAGCAGTGGGTTTGCATTCTTATCTGGAACATCAATGTCTTGTCCCCATGTGGCAGGAATAGCAGCTCTCATCAAATCCAAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGCCTCTCAAACAGGAACTGATGGGAGCATTGTATCTGAAGAGGGTTCCACACCTAAGGCAGCAGACCCATTTGATATTGGTGGAGGGCACGTGAACCCCAACAAAGCAATGGATCCAGGACTCATATATAATATCACCACTGAGGATTATATCCAATTCCTATGTTCCATGGGTTACAATAGTGCATCTATTAGCAAAGTGACCAAGATCACCACAAGTTGTAAGAAAGAAAAACAACAAGAACTGAACCTTAACCTACCTTCTATATCAGTTCCAAACCTGAAGAGGGTTGCAAAAGTCATGAGAACAGTGACAAATGTGGGAAACATAACTGCAGTATACAAAGTTCTAGTAAAGACTCCACATGGCATAAAAGTGAGAGTTAAACCTCAAATTTTGAGTTTCAGTTCAGACACCCGAGTCCTTACCTTCAATGTTAGTTTCTTGTCAACTCAAACTTTGCATGGAGATTACAAATTTGGGAGCCTAACATGGACAGATGGCAAGCATTTTGTAAGGACCCCAATAGCTGTGAGGACCATACAATTTGAATCTTAA 2202 0.4142 MGDKIYHNPETTKRYHHKMLSSLLGSKEAAKNSILYSYKHGFSGFAARLTKSQAEEIEMFPGVVSIFPNRIHKLHTTRSWDFIGVHHSSSKTAFTESNLGEGTIIGVIDTGIWPESASFNDEAMGQIPSRWKGVCQVGEHFNSTNCNKKIIGARWFLKGITDQTKKLINGNDTKEFLSARDAIGHGTHTASTAAGYFVGKANFRGLASGLARGGAPLAHLAIYKACWDISIGDCSDADILKAFDKAIHDGVDVLTVSLGIGIPLFSYVDQRDTIAIGSFHATSKGITVICSAGNSGPMSQTITNTAPWLITVAATTIDRTFPAAITLGNNHTVWGQSIDTVKHNLGYVGLTYSERIALDQSDDLAKDCQSGSLNATMAAGKIVLCFSLSDQQDIVSASLTVKKAGGVGLIYAQFHEDGLGQCDLFPCIKVDYEVGTQILSYIRRARFPTASLSFPKTVIGKWISPRVASFSSRGPSSMSPTVLKPDIAAPGVDILAAFPPEGTAKSSGFAFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTASQTGTDGSIVSEEGSTPKAADPFDIGGGHVNPNKAMDPGLIYNITTEDYIQFLCSMGYNSASISKVTKITTSCKKEKQQELNLNLPSISVPNLKRVAKVMRTVTNVGNITAVYKVLVKTPHGIKVRVKPQILSFSSDTRVLTFNVSFLSTQTLHGDYKFGSLTWTDGKHFVRTPIAVRTIQFES 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3293g00057 733 FunFam Subtilisin-like protease SBT1.5 102 330 - -
Gabi3293g00057 733 FunFam Subtilisin-like protease SBT1.5 602 729 - -
Gabi3293g00057 733 Pfam Subtilase family 100 552 IPR000209 GO:0006508|GO:0008236
Gabi3293g00057 733 Gene3D - 318 459 - -
Gabi3293g00057 733 ProSiteProfiles Serine proteases, subtilase domain profile. 79 585 - -
Gabi3293g00057 733 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Gabi3293g00057 733 MobiDBLite consensus disorder prediction 552 574 - -
Gabi3293g00057 733 PRINTS Subtilisin serine protease family (S8) signature 181 194 IPR015500 -
Gabi3293g00057 733 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Gabi3293g00057 733 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Gabi3293g00057 733 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 726 IPR045051 -
Gabi3293g00057 733 FunFam Subtilisin-like protease SBT5.3 1 75 - -
Gabi3293g00057 733 Gene3D - 602 729 - -
Gabi3293g00057 733 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Gabi3293g00057 733 Gene3D Peptidase S8/S53 domain 102 598 IPR036852 GO:0004252|GO:0006508
Gabi3293g00057 733 CDD Peptidases_S8_3 72 550 IPR034197 -
Gabi3293g00057 733 Pfam Fibronectin type-III domain 631 726 IPR041469 -
Gabi3293g00057 733 Pfam Peptidase inhibitor I9 12 75 IPR010259 -
Gabi3293g00057 733 CDD PA_subtilisin_like 325 452 - -
Gabi3293g00057 733 SUPERFAMILY Subtilisin-like 74 589 IPR036852 GO:0004252|GO:0006508
Gabi3293g00057 733 FunFam subtilisin-like protease SBT1.5 318 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3293g00057 Gabi-Chr3293 466389 469579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3293g00057 1 728 Subtilisin-like Serine Gene Family AT1G32960 51.156 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3293g00057 - - gmx:100792709 1298.11