Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi328g00006 ATGAAGATAACATTTTTCCATGTGGCTTGTTTGGTAGTGTTTTGTCTCCTTGGGGATTCTCAAGGAGGAAGCCTAAGGAAGAATTTCTACCGGAAAACCTGTCCTCAAGCTGAACAGATTGTTCAGACCAAAATCCAACAGCATGTATCTACAAGGCCCGAGTTGCCAGCCAAGTTGATCAGAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGCTCGGTTTTGTTGAACTCCACTTCCAATAACCAAGCGGAGAAGGATGCCATTCCTAATTTAAGTTTGTCTGGCTTTGATGTCATAGATGACATAAAAGAAGCAGTGGAGGCAAAATGTCCCGGAGTTGTATCTTGTGCTGATATAGTAGCATTGGCAGCTAGGGATGCTTTTAACAAACCTATGTGGGAAGTGCTCACCGGTAGAAGAGATGGCACAGTATCCTTAATTGGTGATGTCTTAGCCAATATTCCAGCACCTTTCTTCAATTTCACCCAACTCAAACAAAGCTTCGCTAATAAAAAGCTTACAGTGCACGACCTTGTTGTATTATCAGGAGGACACACAATTGGAATAGGCCATTGCAACTTGTTCAGTAACAGGCTTTTCAACTTCACCGGAAAAGGTGATCAAGATCCTTCTTTGAATCCAACTTATGCAGCTTTCTTGAAGACTAAATGCCAGGGTCTCAGTGACACAACCACAGCAGTAGATATGGATCCTAATAGCTCTGAAAACTTTGACAGTGATTATTATTCTATCCTTCTCCAGAATAAGGGTCTGTTCCAATCAGATGCTGCCCTTTTAACAACCAAGGAATCCAAAAACATTGTTAAAGAATTGGTTAAACAAAACAAGTTCTTCACAGAGTTTGCGCAGTCAATGAAGAGGATGGGAGCCATTGAGGTACTCTCAGGCTCGGCTGGGGAAATTAGGAGGAAGTGTTCCGTTGTCAACTCTTAA 963 0.4206 MKITFFHVACLVVFCLLGDSQGGSLRKNFYRKTCPQAEQIVQTKIQQHVSTRPELPAKLIRMHFHDCFVRGCDGSVLLNSTSNNQAEKDAIPNLSLSGFDVIDDIKEAVEAKCPGVVSCADIVALAARDAFNKPMWEVLTGRRDGTVSLIGDVLANIPAPFFNFTQLKQSFANKKLTVHDLVVLSGGHTIGIGHCNLFSNRLFNFTGKGDQDPSLNPTYAAFLKTKCQGLSDTTTAVDMDPNSSENFDSDYYSILLQNKGLFQSDAALLTTKESKNIVKELVKQNKFFTEFAQSMKRMGAIEVLSGSAGEIRRKCSVVNS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi328g00006 320 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 Gene3D - 28 319 - -
Gabi328g00006 320 Gene3D Peroxidase, domain 2 158 298 - -
Gabi328g00006 320 ProSiteProfiles Plant heme peroxidase family profile. 24 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 CDD secretory_peroxidase 25 318 IPR033905 GO:0004601|GO:0042744
Gabi328g00006 320 PANTHER PEROXIDASE 25-RELATED 12 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 Pfam Peroxidase 41 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Gabi328g00006 320 FunFam Peroxidase 28 161 - -
Gabi328g00006 320 FunFam Peroxidase 158 298 - -
Gabi328g00006 320 SUPERFAMILY Heme-dependent peroxidases 25 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi328g00006 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi328g00006 Gabi-Chr328 63375 64835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi328g00006 1 320 Peroxidase AT1G05260 53.681 5.64e-121 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi328g00006 K00430 - gmx:100775970 554.288