Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3282g00028 ATGGATTCATTAATTAGCAGCACACTGTTCATCCTATTAACGTGCACTATTATACAAGTTCTTCTTTCACTGCATGCAAGAAGCAAGAAGCAAAAACACAAGCTTCCACCAGGACCTTCCCCTCTTAATATTGTGGCAAACCTTGTTCAAATTTGCAAAAGGCCACACCAATATTTGGCAAAGCTTGCAAAGGTTCATGGCCCAATAATGCGTTTGAAACTAGGCCAAGTAACAACCATAGTCATTTCCTCAGAAGACATAGCCAAAGAGGTGTTCCAAACCAATGATCTCTTACTCTCAAGCAGATTCGTTCCTCAAGCTGTAACAGTTCACAATCATGATCATTATAGCTTACCCTACCTCCCAGTTTCAGATCTTTGGCGAGACCTTAGAAAAATATGCAATATCCTATTAGTCTCCAACAAGACCCTTGATGCATGTCAAGAACATAGAAGCAATAAACTACAAGAACTCTTAAATGATATACATAGAAGCAGCCTAATAGGTGAAAGTGTTGATATTGGAAGAGCAGCTTTCAAGACTTCAATTAATATCATATCAACCACTTTTTTCTCTCTGGATTTTGTTAACTCTGTAGGTGAAACTGAGGAGTACAGGGATATAGCAGAGAGTATCATGAAAGCTATTGGAACACCAAACGTGGTGGATTTTTTCCCAGTGTTGAAGATCCTTGATCCACAAGGCCTCATAAAGTGCACACATGGTCACGTGACGAAGTTGTTCCATATCTTTGATCACTTGATTGGGAAACGGTTGAAGCAAAGAGAAGGGGAAAACTATGTAGTAAAGAATGACATGTTGGACAACCTGCTCAACATTTCTCAAGAGAATAGCCAAAAGATGGACAACATAAAGATTAAACACTTCTTTCTTGATCTACTTGTTGCGGGGACTGATACAACTACATATGCATTAGAAAAGGCATTGGGTGAACTACTCCACAACCCAAGGATTATGTCAAAAGCCAAAAGGGAGCTGGAGCAAACCATTGGAATAGGTAAACCTGTTGAGGAATCAGACATTGCTAAACTCCCATATTTACAAGCAATAGTAAAAGAGACCTTACGTTTATACCCACCAGCTCCACTTATATTTCCTAGAAGAGCCAAGGTTGATTTGGAAATCTCAGGCTACACAATCCCACAGGGTGCACTAGTCGTAATCAATGTGTGGGCCATTGGTAGGAACTCAACCATATGGGATAATGCACATTTATTTTTGCCAGAGAGGTTCATTGGGTCAGAAATTGATGTCAAAGGACGAGATTTTCAGTTCACACCATTTGGTAGTGGTAGGCGAATATGTCCTGGCTTACCACTTGCTATGAGAATGTTGCATGTGATGTTGGGATCATTAATCAACTCTTTTGATTGGAAACTTGAAAATAATTTGAAACCAGACGATATGGATATGGATATGGACATGGACAAACCCGTACGAGCTATTCCGGTTATTATAAACAACTAA 1488 0.3958 MDSLISSTLFILLTCTIIQVLLSLHARSKKQKHKLPPGPSPLNIVANLVQICKRPHQYLAKLAKVHGPIMRLKLGQVTTIVISSEDIAKEVFQTNDLLLSSRFVPQAVTVHNHDHYSLPYLPVSDLWRDLRKICNILLVSNKTLDACQEHRSNKLQELLNDIHRSSLIGESVDIGRAAFKTSINIISTTFFSLDFVNSVGETEEYRDIAESIMKAIGTPNVVDFFPVLKILDPQGLIKCTHGHVTKLFHIFDHLIGKRLKQREGENYVVKNDMLDNLLNISQENSQKMDNIKIKHFFLDLLVAGTDTTTYALEKALGELLHNPRIMSKAKRELEQTIGIGKPVEESDIAKLPYLQAIVKETLRLYPPAPLIFPRRAKVDLEISGYTIPQGALVVINVWAIGRNSTIWDNAHLFLPERFIGSEIDVKGRDFQFTPFGSGRRICPGLPLAMRMLHVMLGSLINSFDWKLENNLKPDDMDMDMDMDKPVRAIPVIINN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3282g00028 495 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 490 - -
Gabi3282g00028 495 SUPERFAMILY Cytochrome P450 36 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 Pfam Cytochrome P450 36 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3282g00028 495 CDD CYP76-like 63 473 - -
Gabi3282g00028 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Gabi3282g00028 495 FunFam Cytochrome P450 76C4 27 491 - -
Gabi3282g00028 495 Gene3D Cytochrome P450 27 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3282g00028 Gabi-Chr3282 340722 342481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3282g00028 1 479 Cytochrome P450 AT2G45550 42.710 4.67e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3282g00028 - - gmx:100792017 629.787