Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3282g00018 ATGGTTGGATTCCATAGCGACCATATGCATGGGAACAAGTATAATGGTAATTCTAATAGTATACCGGGTCGTGTTGAACGACTTGTGAGAGAAAGAGAGCTAAGAAGAAGCGGCAGGGCATCTCTTTCCAATGAGTCTCCTGATAATATTAATAATAATGGGGTTACTGAATCTTTTGAGCATGATCTGTTCTTAAGAGAAGACAATAACTCAGGTGCTTATGTTGAACGACTCCAGAACGGGGCGGCAGCAGCAAGGGCTCTTAGTGAGACATGCGAAAGGGAAGATGGGAATCTTTTTAGACAACGGCTTTTGGTGGTGGCCAATAGGCTGCCAGTCTCAGCAGTTAGGAGGGGTGAGGATTCGTGGTCTTTGGAAATGAGTGCTGGCGGCCTGGTGACGGCTCTTTTAGGTGTGAAGGAGTTTGAGGCGAGGTGGATAGGTTGGGCCGGTGTCAATGTGCCCGATGAGATTGGGCAGAAGGCACTTACTAAAGCATTGGCTGAAAAGAGGTGTATCCCTGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGCTATTGCAACAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCTACCACACGTAGTTTTCAGTCTCAGTTTGTAGCATATCAGAAAGCAAATCAAATGTTTGCTGATGTTGTAAACAAGCACTATGAAGAGGGTGATGTGGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCACAATGCTTGAAGAAATATAACAGCAAAATGAAAGTAGGCTGGTTTCTCCACACCCCATTTCCATCTTCTGAAATTCACAGGACACTGCCATCTCGTTCAGAGCTCCTGCATGCTGTTCTTGCAGCTGATTTGGTTGGTTTTCACACCTATGATTATGCACGACATTTTGTTAGTGCATGTACTCGCATCCTTGGACTTGAGGGAACACCTGAAGGGGTTGAGGATCAAGGGAAGCTGACTCGAGTTGCTGCATTTCCAATTGGTATAGACTCGCAACGATTCATACGTGCACTTGACCTTCCTCCAGTCCAGGAACACATCAAAGAATTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATCAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAATTCTTGGAAGAGAATGCTTCTTGGCGTGATAAAGTCGTTCTGCTTCAAATTGCTGTGCCAACAAGAACGGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTCCATGAAATTGTTGGCCGCATCAATGGCAGATTTGGATCATTGACTGCTGTTCCTATACATCACCTGGACCGCTCTCTTGATTTTCATGCACTGTGTGCGTTGTATGCTGTTACGGATGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGTTACGAATTTGTGGCCTGCCAAGATAAAAAGAAAGGAGTTCTCATTCTTAGCGAATTTGCTGGTGCTGCACAGTCTCTTGGTGCTGGGGCAATTCTGGTCAACCCCTGGAACATCACAGAAGTTGCTGCTGCAATTGCCAAGGCTCTGAATATGCCTTCTGCGGAAAGAGAGAAGAGACATAGGCATAACTTTCTTCATGTAAAAACCCACACTGCCCAGGAATGGGCAGAAACTTTTGTAAGCGAACTGAATGATACTGTTGTTGAGGCACAGCTAAGGACTAAACAAGTTCCACCACGGCTCCCAACCACGACTGCAATTGAGCGATACCTACAGTCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTTTAACTGAACCAGTCGAGAAAAAAGGTGATCAGTATAAAGAAATGGAACTCGCAGTGCATCCAGAACTGAAACAACCCTTGACAGCACTTTGCTGCGACCCGAAGACAACAGTTGTTGTGCTTAGTGGAAGTAAAAGAACAATTCTAGATGAAAACTTTAAAGAATATGACATGTGGCTGGCAGCAGAGAATGGGATGTTTTTAAACCCTTCAAAGGGAGAATGGATGACAACAATGCCAGAGCAACTGAATATGGAGTGGGTTGATAGCGTGAAGCAAGTTTTTGAATACTTCAAAGAAAGAACACCTCGGTCACATTTCGAAGAAAGGGAAGCTTCACTTGTATGGAATTACAAACACGCAGATGTTGAGTTTGGAAGACTCCAAGCAAGGGACATGCTTCAGCATCTCTGGACAGGTCCAATTTCTAATGCACCAGTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAGGTGCGAGCTGCTGGCGTTACGAAGGGAGCAGCTATTGACCGCATCCTTGGTGAGATAGTCCACAGTAAATCCATGACAACACCAATTGATTATGTTCTGTGCGTAGGACATTTTCTGGCGAAGCAGGATGAAGATATATATTCCTTTTTTGAGCCAGAGCTTCCTTATCTTGGTGTGGGTTTTACACGAAGTAAGGCAACAGATGGAGTTAAGTATCCTGTTGAGAGGACATCGTCCTTGAAGATCCCAGCTGGTAAAAATGGAACAAAGTCATCTCATAATAAGGGACAACGTCCTTTGTCAAATTCTGAGAAAAAAACAAATAATCATATCTGCCGTGCACCAAAGCGGCAAGCTCCTGAAAAGGTCTCTTGGAATGTCCTTGACCTCAAGAAGGAGAATTACTTCTCATGTTCTGTTGGACGAACTCAAACAAATGCTCGCTATACGCTTGGATCATCAGATGACGTTGTTGTATTCCTCAAGGAACTAGCTGATGCATCTTCAAACTCTTTATTACCTAGTGTCTGA 2829 0.4351 MVGFHSDHMHGNKYNGNSNSIPGRVERLVRERELRRSGRASLSNESPDNINNNGVTESFEHDLFLREDNNSGAYVERLQNGAAAARALSETCEREDGNLFRQRLLVVANRLPVSAVRRGEDSWSLEMSAGGLVTALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFVAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPQCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSQRFIRALDLPPVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENASWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMPSAEREKRHRHNFLHVKTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLPTTTAIERYLQSTNRLLILGFNGTLTEPVEKKGDQYKEMELAVHPELKQPLTALCCDPKTTVVVLSGSKRTILDENFKEYDMWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKQVFEYFKERTPRSHFEEREASLVWNYKHADVEFGRLQARDMLQHLWTGPISNAPVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCVGHFLAKQDEDIYSFFEPELPYLGVGFTRSKATDGVKYPVERTSSLKIPAGKNGTKSSHNKGQRPLSNSEKKTNNHICRAPKRQAPEKVSWNVLDLKKENYFSCSVGRTQTNARYTLGSSDDVVVFLKELADASSNSLLPSV 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3282g00018 942 MobiDBLite consensus disorder prediction 843 875 - -
Gabi3282g00018 942 Gene3D Glycogen Phosphorylase B; 350 553 - -
Gabi3282g00018 942 NCBIfam trehalose-phosphatase 599 812 IPR003337 GO:0003824|GO:0005992
Gabi3282g00018 942 CDD GT20_TPS 103 568 IPR001830 GO:0003824|GO:0005992
Gabi3282g00018 942 SUPERFAMILY HAD-like 600 931 IPR036412 -
Gabi3282g00018 942 Pfam Trehalose-phosphatase 606 827 IPR003337 GO:0003824|GO:0005992
Gabi3282g00018 942 Pfam Glycosyltransferase family 20 103 568 IPR001830 GO:0003824|GO:0005992
Gabi3282g00018 942 Gene3D - 603 784 IPR023214 -
Gabi3282g00018 942 MobiDBLite consensus disorder prediction 1 24 - -
Gabi3282g00018 942 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 103 568 IPR012766 GO:0003825|GO:0005992
Gabi3282g00018 942 Gene3D - 690 770 - -
Gabi3282g00018 942 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 102 571 - -
Gabi3282g00018 942 MobiDBLite consensus disorder prediction 848 874 - -
Gabi3282g00018 942 CDD HAD_TPP 601 819 - -
Gabi3282g00018 942 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 350 553 - -
Gabi3282g00018 942 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 95 932 IPR001830 GO:0003824|GO:0005992
Gabi3282g00018 942 Gene3D Glycogen Phosphorylase B; 95 349 - -
Gabi3282g00018 942 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 690 770 - -
Gabi3282g00018 942 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 95 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3282g00018 Gabi-Chr3282 168806 182100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3282g00018 9 936 Trehalose Biosynthesis Gene Families AT1G78580 76.956 0.0 1472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3282g00018 K16055 - gmx:100789554 1594.33