Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3282g00015 ATGGTTGGATTCCATAGCGACCATATGCATGGGAACAAGTATAATGGTAATTCTAATAGTATACCGGGTCGTGTTGAACGACTTGTGAGAGAAAGAGAGCTAAGAAGAAGCGGCAGGGCATCTCTTTCCAATGAGTCTCCTGATAATATTAATAATAATGGGGTTACTGAATCTTTTGAGCATGATCTGTTCTTAAGAGAAGACAATAACTCAGGTGCTTATGTTGAACGACTCCAGAACGGGGCGGCAGCAGCAAGGGCTCTTAGTGAGACATGCGAAAGGGAAGATGGGAATCTTTTTAGACAACGGCTTTTGGTGGTGGCCAATAGGCTGCCAGTCTCAGCAGTTAGGAGGGGTGAGGATTCGTGGTCTTTGGAAATGAGTGCTGGCGGCCTGGTGACGGCTCTTTTAGGTGTGAAGGAGTTTGAGGCGAGGTGGATAGGTTGGGCCGGTGTCAATGTGCCCGATGAGATTGGGCAGAAGGCACTTACTAAAGCATTGGCTGAAAAGAGGTGTATCCCTGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGCTATTGCAACAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCTACCACACGTAGTTTTCAGTCTCAGTTTGTAGCATATCAGAAAGCAAATCAAATGTTTGCTGATGTTGTAAACAAGCACTATGAAGAGGGTGATGTGGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCACAATGCTTGAAGAAATATAACAGCAAAATGAAAGTAGGCTGGTTTCTCCACACCCCATTTCCATCTTCTGAAATTCACAGGACACTGCCATCTCGTTCAGAGCTCCTGCATGCTGTTCTTGCAGCTGATTTGGTTGGTTTTCACACCTATGATTATGCACGACATTTTGTTAGTGCATGTACTCGCATCCTTGGACTTGAGGGAACACCTGAAGGGGTTGAGGATCAAGGGAAGCTGACTCGAGTTGCTGCATTTCCAATTGGTATAGACTCGCAACGATTCATACGTGCACTTGACCTTCCTCCAGTCCAGGAACACATCAAAGAATTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATCAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAATTCTTGGAAGAGAATGCTTCTTGGCGTGATAAAGTCGTTCTGCTTCAAATTGCTGTGCCAACAAGAACGGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTCCATGAAATTGTTGGCCGCATCAATGGCAGATTTGGATCATTGACTGCTGTTCCTATACATCACCTGGACCGCTCTCTTGATTTTCATGCACTGTGTGCGTTGTATGCTGTTACGGATGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGTTACGAATTTGTGGCCTGCCAAGATAAAAAGAAAGGAGTTCTCATTCTTAGCGAATTTGCTGGTGCTGCACAGTCTCTTGGTGCTGGGGCAATTCTGGTCAACCCCTGGAACATCACAGAAGTTGCTGCTGCAATTGCCAAGGCTCTGAATATGCCTTCTGCGGAAAGAGAGAAGAGACATAGGCATAACTTTCTTCATGTAAAAACCCACACTGCCCAGGAATGGGCAGAAACTTTTGTAAGCGAACTGAATGATACTGTTGTTGAGGCACAGCTAAGGACTAAACAAGTTCCACCACGGCTCCCAACCACGACTGCAATTGAGCGATACCTACAGTCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTTTAACTGAACCAGTCGAGAAAAAAGGTGATCAGTATAAAGAAATGGAACTCGCAGTGCATCCAGAACTGAAACAACCCTTGACAGCACTTTGCTGCGACCCGAAGACAACAGTTGTTGTGCTTAGTGGAAGTAAAAGAACAATTCTAGATGAAGTAATTCTTGAGAATGGGATGTTTTTAAACCCTTCAAAGGGAGAATGGATGACAACAATGCCAGAGCAACTGAATATGGAGTGGGTTGATAGCGTGAAGCAAGTTTTTGAATACTTCAAAGAAAGAACACCTCGGTCACATTTCGAAGAAAGGGAAGCTTCACTTGTATGGAATTACAAACACGCAGATGTTGAGTTTGGAAGACTCCAAGCAAGGGACATGCTTCAGCATCTCTGGACAGGTCCAATTTCTAATGCACCAGTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAGGTGCGAGCTGCTGGCGTTACGAAGGGAGCAGCTATTGACCGCATCCTTGGTGAGATAGTCCACAGTAAATCCATGACAACACCAATTGATTATGTTCTGTGCGTAGGACATTTTCTGGCGAAGCAGGATGAAGATATATATTCCTTTTTTGAGCCAGAGCTTCCTTATCTTGGTGTGGGTTTTACACGAAGTAAGGCAACAGATGGAGTTAAGTATCCTGTTGAGAGGACATCGTCCTTGAAGATCCCAGCTGGTAAAAATGGAACAAAGTCATCTCATAATAAGGGACAACGTCCTTTGTCAAATTCTGAGAAAAAAACAAATAATCATATCTGCCGTGCACCAAAGCGGCAAGCTCCTGAAAAGGTCTCTTGGAATGTCCTTGACCTCAAGAAGGAGAATTACTTCTCATGTTCTGTTGGACGAACTCAAACAAATGCTCGCTATACGCTTGGATCATCAGATGACGTTGTTGTATTCCTCAAGGAACTAGCTGATGCATCTTCAAACTCTTTATTACCTAGTGTCTGA 2805 0.4349 MVGFHSDHMHGNKYNGNSNSIPGRVERLVRERELRRSGRASLSNESPDNINNNGVTESFEHDLFLREDNNSGAYVERLQNGAAAARALSETCEREDGNLFRQRLLVVANRLPVSAVRRGEDSWSLEMSAGGLVTALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFVAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPQCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSQRFIRALDLPPVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENASWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMPSAEREKRHRHNFLHVKTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLPTTTAIERYLQSTNRLLILGFNGTLTEPVEKKGDQYKEMELAVHPELKQPLTALCCDPKTTVVVLSGSKRTILDEVILENGMFLNPSKGEWMTTMPEQLNMEWVDSVKQVFEYFKERTPRSHFEEREASLVWNYKHADVEFGRLQARDMLQHLWTGPISNAPVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCVGHFLAKQDEDIYSFFEPELPYLGVGFTRSKATDGVKYPVERTSSLKIPAGKNGTKSSHNKGQRPLSNSEKKTNNHICRAPKRQAPEKVSWNVLDLKKENYFSCSVGRTQTNARYTLGSSDDVVVFLKELADASSNSLLPSV 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3282g00015 934 MobiDBLite consensus disorder prediction 835 867 - -
Gabi3282g00015 934 Gene3D Glycogen Phosphorylase B; 95 349 - -
Gabi3282g00015 934 SUPERFAMILY HAD-like 600 923 IPR036412 -
Gabi3282g00015 934 CDD GT20_TPS 103 568 IPR001830 GO:0003824|GO:0005992
Gabi3282g00015 934 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 95 924 IPR001830 GO:0003824|GO:0005992
Gabi3282g00015 934 Pfam Glycosyltransferase family 20 103 568 IPR001830 GO:0003824|GO:0005992
Gabi3282g00015 934 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 682 762 - -
Gabi3282g00015 934 Gene3D Glycogen Phosphorylase B; 350 553 - -
Gabi3282g00015 934 MobiDBLite consensus disorder prediction 1 24 - -
Gabi3282g00015 934 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 102 571 - -
Gabi3282g00015 934 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 350 553 - -
Gabi3282g00015 934 Pfam Trehalose-phosphatase 606 819 IPR003337 GO:0003824|GO:0005992
Gabi3282g00015 934 Gene3D - 682 762 - -
Gabi3282g00015 934 MobiDBLite consensus disorder prediction 840 866 - -
Gabi3282g00015 934 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 103 568 IPR012766 GO:0003825|GO:0005992
Gabi3282g00015 934 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 95 349 - -
Gabi3282g00015 934 Gene3D - 603 776 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3282g00015 Gabi-Chr3282 168806 188528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3282g00015 9 928 Trehalose Biosynthesis Gene Families AT1G78580 75.899 0.0 1442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3282g00015 K16055 - gmx:100789554 1563.9