Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3281g00032 ATGGAAGGGATAGGTCTCAATTCAGTGTTAGAGAAAAAGGCCAGACCACAAGAACAATTGAACTGTCCAAGGTGCAATTCAACCAACACCAAGTTCTGTTATTACAACAACTATAGCCTCACACAACCTAGATATTTCTGCAAGACTTGCAGAAGGTATTGGACTGAAGGTGGGTCTCTCAGAAACGTTCCCGTTGGAGGTGGTTCCAGGAAGAACAAGAAGGTCATCATGACTTCATCATCATCATCATCATCATTGTCAACAGCTTCACCAAAGGTTCCAGACTTAAATCCACCAAGCCTCTCAGTCTCAACTATTTGTTCCCAAAACCCTAAAATGCAAAGAGGCCACGATCTTAATTTGGCTTTCCCAGATATGGAGAAGTATCATGGCATGTCTCAATATGTTGAGATGCCCAAACTTGACCATAGCTCTTCTTCTGTTCCTACTTCTCTCTCAGCAGTTGAGATACTTCAGTCTAACATGGCTTCTAGTTCTAGGGGTTTGAATCCTTATTTTCCTAATTCCTTGATGTCAAGTTCAAATAATGCTATTTACCCATCTGGGTTTCCCATGCAAGAAATTAAACCAAACCTTGGTTTTTCAATTGATGGGCTTGGAAATGGATCATATGGGGTACAAGAGAATGGTGGGAGGGTTTTGTTCCCTTTTGGAGACATGAAGCAGCTTTCTGCAGGTGTTGAAGTGGAACACAATAAAGAACAAGGAAATTCAACTGGATATTGGACTGGAATGATTAATGGAGGGTCATCATGGTAA 780 0.4128 MEGIGLNSVLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVIMTSSSSSSSLSTASPKVPDLNPPSLSVSTICSQNPKMQRGHDLNLAFPDMEKYHGMSQYVEMPKLDHSSSSVPTSLSAVEILQSNMASSSRGLNPYFPNSLMSSSNNAIYPSGFPMQEIKPNLGFSIDGLGNGSYGVQENGGRVLFPFGDMKQLSAGVEVEHNKEQGNSTGYWTGMINGGSSW 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3281g00032 259 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Gabi3281g00032 259 MobiDBLite consensus disorder prediction 73 96 - -
Gabi3281g00032 259 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 161 IPR045174 GO:0003700|GO:0006355
Gabi3281g00032 259 MobiDBLite consensus disorder prediction 61 96 - -
Gabi3281g00032 259 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Gabi3281g00032 259 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3281g00032 Gabi-Chr3281 311059 312667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3281g00032 12 259 C2C2-Dof Transcription Factor Family AT3G61850 52.174 1.13e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi3281g00032 zf-Dof 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3281g00032 - - gmx:778111 349.747