Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3281g00023 ATGAGATTGCTTGCGATGATTCTTTTCAACCTCTTATTTCTCTTAACTCTCGCCCTCGTCGTTTTATTATCGATTCGGGCGATGGTGTTAGAAACGGCCATCAAGAAGCTATGGAGAATCATCCAAGATTGGTTCCACGTGTACCAGTTCTTAAAAGTGCCAGAACTAAACGAAACTATGCAGCACAATCACCTCTACAGAAAGGTCTCCCTCTACTTGCATTCCCTGCCTTCCATCGAAGACTCAGACTTCGCCCACCTCATCACAGTGAAGAAGCAAAACGACATCGTTCTCTGCCTCGGTCCTAATCAAACAATCGAGGACCGTTTTCTCGGAGCCACCGTCTTCTGGTTCAACGAAACCGGCGACGAAAGACCCGAACCTAACAGTACCAGCACCAGAACCAGAGCCAGAACCAGAACCTTCGTTCTCAAGATAAGAAAGGTGGATAAGCGCCGAATCCTTCGCCCTTATCTTCAACACATTCATGCAGTTGCCGACGAAATCGAGCAGCAAGGGAACCGTGATTTGCGCCTCTACATGAACGCCGACTCCTTCGGACGGTGGAGATCCATTCCTTTTACCCACCCGTCCACGCTCGACACCATCGCCATGGAACCCGATCTCAAGAACAGAGTCAAGACCGATCTCGAATCTTTCCTCAAAGCCAAACAATACTACCACCGGTTGGGCCGGGCCTGGAAACGGAGCTTCCTCTTGTATGGTCCCTCCGGTACCGGAAAATCGAGCTTCGTCGCCGCCATGGCCAATTTCCTCTGCTACGACGTGTACGACGTCGATCTGTCTAAGGTTCCAAGCGATTCGGATCTCAAATTCCTCCTCCTCCAAACGACGCCGAAATCGATCGTGGTCATCGAGGACCTGGACCGTTTCCTTGCGGAGAAATCGAACAGGGGAGTGAGCTTGTCTGGGATACTGAACTTCATGGACGGAATTTTGAGCTCGTGCTGCGGCGAAGAGAGGGTTATGGTGTTCACGATGAACAGCAAGGATCACGTGGATCCGAACTTGCTTCGGCCGGGTCGGGTGGATGTCCATATCCATTTCCCGCTTTGCGATTTCTCGGCGTTCAAGACGCTTGCGAGTAGCTACCTTGGCGTGAAGGACCACAAGCTGTTCCCTCAGGTGCAGGAGATCTTTCAGAACGGGGCGAGTTTGAGCCCCGCCGAAATCGGTGAGTTGATGATAGCGAACCGTAACTCGCCGAGTCGGGCCATTAAATCGGTCATCACCGCCTTGCAAACGGACGGCGATGGCAGGGGGTGCGGGATGATCGGACGGCGTACGGGGGATGATGTATTGGATGAACCCGATGATGTGCTATGCGGTGAGGGTCTCCATTCAGTTAAGGATTTGCGGAAAATGCACGGTTTTTTCAGATTGAGGGTTGCCAGAAGATCTCCGTCGTCCAATAGTTCCTTGGCAAGCCCGTTGCGTTGA 1461 0.5209 MRLLAMILFNLLFLLTLALVVLLSIRAMVLETAIKKLWRIIQDWFHVYQFLKVPELNETMQHNHLYRKVSLYLHSLPSIEDSDFAHLITVKKQNDIVLCLGPNQTIEDRFLGATVFWFNETGDERPEPNSTSTRTRARTRTFVLKIRKVDKRRILRPYLQHIHAVADEIEQQGNRDLRLYMNADSFGRWRSIPFTHPSTLDTIAMEPDLKNRVKTDLESFLKAKQYYHRLGRAWKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDVDLSKVPSDSDLKFLLLQTTPKSIVVIEDLDRFLAEKSNRGVSLSGILNFMDGILSSCCGEERVMVFTMNSKDHVDPNLLRPGRVDVHIHFPLCDFSAFKTLASSYLGVKDHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIKSVITALQTDGDGRGCGMIGRRTGDDVLDEPDDVLCGEGLHSVKDLRKMHGFFRLRVARRSPSSNSSLASPLR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3281g00023 486 PANTHER BCS1 AAA-TYPE ATPASE 27 421 - -
Gabi3281g00023 486 Pfam Domain associated at C-terminal with AAA 30 117 IPR025753 -
Gabi3281g00023 486 Gene3D - 191 354 IPR027417 -
Gabi3281g00023 486 Gene3D - 355 420 - -
Gabi3281g00023 486 Pfam ATPase family associated with various cellular activities (AAA) 239 358 IPR003959 GO:0005524|GO:0016887
Gabi3281g00023 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 419 IPR027417 -
Gabi3281g00023 486 SMART AAA_5 234 360 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3281g00023 Gabi-Chr3281 267759 269884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3281g00023 230 356 Calmodulin-binding Proteins AT3G56690 28.571 4.76e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3281g00023 - K08900 gmx:100805212 736.102