Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3281g00018 ATGACGATGACCGACATTGATCATAAACTCTGGATCGTTGCTTTGGCCTCTAAATGCACACAAGAAAACCTTGCATGGTCTCTTATGATCATGGCCTTACTCTGGTTAACCATGACTTTCTTTTACTGGTCTCACCCAGGTGGTCCTGCCTGGGGCAAGTACTACAGCTATTACTACTATTCCACCTTGAGAAAATTCCCATCACTTCCTTCACTAGCTACTGCTGCTAGTACTAGTACTAGTAGTAGTACCTCTGGCTCTGTCTTAGAGCAAAACAACGCAAACACTATGATTCCTGGTCCCAAAGGGTGGCCTTTGATTGGAAGCATGACTCTCATGACTTGTCTTGCCCACCACCGTATTGGGACAGCCGCAATCGCATGCAGAGGAAAGAGGCTCATGGCCTTTAGCCTCGGCGAAACCCGTGCCATCGTCACGTGCCACCCTGACGTTGCTAAGGAGATTCTCAACAGCTCCGTCTTCGCTGATCGCCCCGTCAAAGAATCTGCATACAGCCTCATGTTCAACAGAGCAATCGGGTTTGCCCCTTACGGTGTTTACTGGCGAACCCTCAGGCGAATCGCCGCCACTCACCTCTTCTGCCCAAGGCAAATCAAAGCCTCCGAGTTGCAGCGGTCTATAATCGCCGCCCAAATGGTTGACATGTTTAAAAACAACAGTCAACAGAGCTCACGTGTTCGGGAAGTGCTCAAGAAAGGGTCGCTGAATAACATGATGTGCTCGGTGTTTGGACAGCAGTATAAGCTGCACCAGTCAAACAGTGAAATAGAAGAGCTTAGAGGTTTAGTGGATGAAGGGTATGACTTGTTGGGTTTATTTAATTGGGGTGACCATCTTCCTTGGCTTGCGCATTTCGATGCTCAAAAAATCCGGTTCAGGTGCTCCAATCTCGTCCCCAAGGTGAACCGGTTCGTCACTAGAATAATTGCCCAACACCGAACCCATAAAACCCAAACCAACCAGGATTTCGTTGACGTCTTGCTCTCCCTCCAAGGACCCGATCAATTATCCGACTCCGATATGATCGCCGTACTTTGGGAAATGATATTTAGGGGGACAGACACAGTGGCAGTTTTGATCGAGTGGATACTAGCGAGGATGGTGCTTCATCCTGATGTGCAGTCCAAGGTTCAAGCGGAGCTCGATGCGGTTGTTGGGAGGTCACGCGCCGTCGCGGAGGATGACGTGGCGGCGATGGTATACCTTCCGGCGGTGGTGAAGGAAGTGTTGAGGTTGCACCCTCCTGGCCCACTTCTGTCGTGGGCCCGCTTGTCCATCAGCGATACGACCATTGATGGGTATCACGTGCCTGCCGGGACCACTGCTATGGTGAACATGTGGGCTATTTGCAGGGACCCACATGTGTGGAGGGACCCGCTCGAATTTATGCCAGAGAGGTTCCTCGCTGCAGAAGGAGGAGATACCGAGTTCTCAGTTTTCGGGTCGGATCTCAGGCTGGCTCCGTTTGGGTCGGGTAGGAGGGTATGCCCCGGGAAGATGCTGGGGTTGGTTACAGTGAGCTTTTGGGTGGCGTCGCTTTTACACGAGTATGAATGGCTACCGTCTGATGAGAACGAAGTTGATCTATCAGAGGTCCTGAGGCTCTCTTGCGAAATGGCTAACCCTCTCACCGTTAAAGTGCGCCCTAGGCGTGGGTTATAA 1683 0.5134 MTMTDIDHKLWIVALASKCTQENLAWSLMIMALLWLTMTFFYWSHPGGPAWGKYYSYYYYSTLRKFPSLPSLATAASTSTSSSTSGSVLEQNNANTMIPGPKGWPLIGSMTLMTCLAHHRIGTAAIACRGKRLMAFSLGETRAIVTCHPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPRQIKASELQRSIIAAQMVDMFKNNSQQSSRVREVLKKGSLNNMMCSVFGQQYKLHQSNSEIEELRGLVDEGYDLLGLFNWGDHLPWLAHFDAQKIRFRCSNLVPKVNRFVTRIIAQHRTHKTQTNQDFVDVLLSLQGPDQLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPDVQSKVQAELDAVVGRSRAVAEDDVAAMVYLPAVVKEVLRLHPPGPLLSWARLSISDTTIDGYHVPAGTTAMVNMWAICRDPHVWRDPLEFMPERFLAAEGGDTEFSVFGSDLRLAPFGSGRRVCPGKMLGLVTVSFWVASLLHEYEWLPSDENEVDLSEVLRLSCEMANPLTVKVRPRRGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3281g00018 560 CDD CYP78 129 550 - -
Gabi3281g00018 560 SUPERFAMILY Cytochrome P450 98 557 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PRINTS E-class P450 group I signature 452 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PRINTS E-class P450 group I signature 367 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PRINTS E-class P450 group I signature 347 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PRINTS E-class P450 group I signature 503 526 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PRINTS E-class P450 group I signature 493 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 Pfam Cytochrome P450 99 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 496 505 IPR017972 GO:0005506|GO:0016705
Gabi3281g00018 560 PRINTS P450 superfamily signature 503 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PRINTS P450 superfamily signature 358 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PRINTS P450 superfamily signature 494 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3281g00018 560 PANTHER CYTOCHROME P450 78A7-RELATED 8 558 - -
Gabi3281g00018 560 FunFam Cytochrome P450 78A5 90 557 - -
Gabi3281g00018 560 Gene3D Cytochrome P450 90 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3281g00018 Gabi-Chr3281 197403 199304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3281g00018 12 558 Cytochrome P450 AT2G46660 65.761 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3281g00018 K20619 - gmx:100799906 852.818