Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3281g00016 ATGATGTTGGGCAAAAGCTTTAGACAAGTTGCGGTGACATATCATCACCATCACCACCACCATGGAAAAGAAGTCATTACCAAAGATATACCAAAAGGGTGCATGGCAATCAAGGTTGGTCAAGGCGAAGAGCAACAGAGAATAACGGTGCCCGTGAGTTACCTCAACCACCCACTGTTTTCTCAGCTGTTGAAGGAGGCGGAGGAAGAGTATGGTTTTGCTCAGCAGGGAACCATAATTATACCTTGTCAAGTGCAGGAGTTTAAGCATGTTCAACACATGATTGATAGGGACAGGTCACTCCAACAACAACAACAACACCACCACCACCTCGTTGGCTGCTTCAGGGCTTGA 354 0.4661 MMLGKSFRQVAVTYHHHHHHHGKEVITKDIPKGCMAIKVGQGEEQQRITVPVSYLNHPLFSQLLKEAEEEYGFAQQGTIIIPCQVQEFKHVQHMIDRDRSLQQQQQHHHHLVGCFRA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3281g00016 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 91 IPR003676 GO:0009733
Gabi3281g00016 117 Pfam Auxin responsive protein 24 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3281g00016 Gabi-Chr3281 166887 167738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3281g00016 29 91 Calmodulin-binding Proteins AT5G20810 50.794 1.21e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3281g00016 K14488 - pvy:116108881 147.517