Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3281g00014 ATGGGACAGTGCTACGGCAAGACCAATCCCACCGCGGAGAACGAAAATGAACATGACCCAAACACAACCACCATAATTGCCACCTCCGGCAACGATGACGGACCTCGCTCTCCGCTTCCCTCCGACGGCGGCTTCTCCAACGGGTTTCCGTCGGTTAAGAACACGCCAGCTCGGTCCTCCTCGCACGCCAGCCCATGGCCGAGCCCTTACCCTCACGGAGTAAACCCGAGCCCGTCTCCGGCGAGGGCCACGACTCCCAGGAGGTTTTTCAGGCGTCCTTTTCCGCCGCCGTCTCCGGCGAAGCATATAAGGGCGTCACTGGCGAAGAGGCTTGGGCAGGCGAAGCCGAAGGAAGGGCCAATCCCGGAGGAGGGTGGGGCGGAAGCGGAGCAGTCGCTGGATAAGAGCTTTGGGTATAGCAAGAACTTTGGAGCTAAGTATGAGTTGGGAAAGGAAGTGGGGAGAGGGCATTTTGGTCATACGTGCTCTGCAAGGGGCAAAAAGGGTGACCTCAAAGACCATCCTGTTGCTGTTAAAATCATTTCCAAGGCCAAGATGACCACAGCAATAGCGATTGAAGATGTTCGTAGGGAGGTGAAGCTGTTAAGAGCTCTATCTGGGCATAAGCATCTCGTCAAATTTCATGATGCTTGTGAGGATGCCAATAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACCGAATTTTGTCAAGGGGAGGAAAGTATACAGAGGAGGATGCGAAGATTATAGTTTTGCAGGTTCTAAGCATAGTTGCTTTTTGTCATCTTCAGGGTGTTATGCACCGTGACCTGAAACCCGAGAATTTTCTCTTCACTTCAAGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTGTCTGACTTCATCAGGCCAGATGAACGTCTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTGTGGAAGCAGATATATGGAGCATTGGTGTAATTACCTACATCTTATTGTGTGGAAGTAGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTGCAGTGCTCAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCATCTGTATCTGCAGAGGCCAAGGACTTTGTTAAAAGGCTGCTAAACAAGGACTACAGGAAAAGAATGACTGCTGCCCAAGCTTTAACTCACCCTTGGTTGAGGGATGACAGCCGTCCTATCCCTTTAGATATATTAATTTTTAAATTGGTGAAGTCGTATCTTCATGCGACGCCATTCAAACGAGCAGCACTGAAGGCCCTTGCAAAAGCCTTGACAGAGGATCAGCTTGTGTATCTTAGAGCGCAATTCATATTGTTGGAACCAAATAGAGATGGGCATGTCTCCCTTGACAATTTCAAAATGGCTCTTGTACGTCATGCAACTGATGCCATGAGGGAATCAAGGGTTCTTGACATCATACATGCGATGGAACCACTTGCCTACAGAAAGATGGATTTTGAAGAATTTTGTGCAGCTGCAACTAGCACATATCAATTGGAGGCACTTGATAGGTGGGAAGATATTGCCAGCACTGCTTTTGAGCATTTTGAGGGAGAGGGCAACCGGGTGATATCGATTGAAGAATTAGCAAGGGAACTGAATCTTGGTCCTTCATCTTATTCAATTCTCAAAGATTGGATACGAAATACTGATGGAAAACTTAGTTTACTCGGATATACAAAATTTTTGCATGGCGTGACTCTCCGGACTTCAATCCCAAGACCCCGTTAG 1800 0.475 MGQCYGKTNPTAENENEHDPNTTTIIATSGNDDGPRSPLPSDGGFSNGFPSVKNTPARSSSHASPWPSPYPHGVNPSPSPARATTPRRFFRRPFPPPSPAKHIRASLAKRLGQAKPKEGPIPEEGGAEAEQSLDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARGKKGDLKDHPVAVKIISKAKMTTAIAIEDVRREVKLLRALSGHKHLVKFHDACEDANNVYIVMELCEGGELLDRILSRGGKYTEEDAKIIVLQVLSIVAFCHLQGVMHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPSVSAEAKDFVKRLLNKDYRKRMTAAQALTHPWLRDDSRPIPLDILIFKLVKSYLHATPFKRAALKALAKALTEDQLVYLRAQFILLEPNRDGHVSLDNFKMALVRHATDAMRESRVLDIIHAMEPLAYRKMDFEEFCAAATSTYQLEALDRWEDIASTAFEHFEGEGNRVISIEELARELNLGPSSYSILKDWIRNTDGKLSLLGYTKFLHGVTLRTSIPRPR 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3281g00014 599 CDD STKc_CAMK 146 408 - -
Gabi3281g00014 599 Gene3D Phosphorylase Kinase; domain 1 140 236 - -
Gabi3281g00014 599 Gene3D - 419 589 - -
Gabi3281g00014 599 FunFam CDPK-related kinase 1 444 517 - -
Gabi3281g00014 599 Gene3D Transferase(Phosphotransferase) domain 1 237 418 - -
Gabi3281g00014 599 MobiDBLite consensus disorder prediction 1 101 - -
Gabi3281g00014 599 FunFam Calcium-dependent protein kinase SK5 319 416 - -
Gabi3281g00014 599 Pfam Protein kinase domain 147 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3281g00014 599 ProSitePatterns Protein kinases ATP-binding region signature. 153 179 IPR017441 GO:0005524
Gabi3281g00014 599 MobiDBLite consensus disorder prediction 47 66 - -
Gabi3281g00014 599 SUPERFAMILY EF-hand 435 588 IPR011992 -
Gabi3281g00014 599 PANTHER SERINE/THREONINE-PROTEIN KINASE 131 574 - -
Gabi3281g00014 599 FunFam CDPK-related kinase 1 140 235 - -
Gabi3281g00014 599 SMART serkin_6 147 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3281g00014 599 SUPERFAMILY Protein kinase-like (PK-like) 146 431 IPR011009 -
Gabi3281g00014 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Gabi3281g00014 599 ProSiteProfiles Protein kinase domain profile. 147 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3281g00014 599 MobiDBLite consensus disorder prediction 1 35 - -
Gabi3281g00014 599 FunFam CDPK-related kinase 3 139 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3281g00014 Gabi-Chr3281 124744 135881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3281g00014 28 593 EF-hand Containing Proteins AT3G50530 61.589 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi3281g00014 Pkinase 4.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3281g00014 K13412 - qsa:O6P43_027422 998.808