Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3279g00001 ATGGCCATTAGAAAATCCAATAAGCTCCCACAAGCAGATGTTATCAAGCAAATTCTCAAAAGATGCTCTAGTTTTGGAAAGAAACAGGGTTGCAATGAAGAGGGTCTTCCTCAAGATGTACCAAAAGGTCACTTTGCAGTGTATGTTGGTGAAAACAGGACCAGATATATTATCCCAATTTCATGGTTGGCTCATCCACAGTTTCAAAGTCTTCTCCAAAGAGCTGAGGAGGAGTTTGGGTTCAATCATGACATGGGCCTTACCATCCCATGTGATGAAGTTGTTTTTGAGTTCCTTACCTCATTTATTAGATAA 315 0.4 MAIRKSNKLPQADVIKQILKRCSSFGKKQGCNEEGLPQDVPKGHFAVYVGENRTRYIIPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSFIR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3279g00001 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 101 IPR003676 GO:0009733
Gabi3279g00001 104 Pfam Auxin responsive protein 26 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3279g00001 Gabi-Chr3279 25568 25882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3279g00001 19 104 Calmodulin-binding Proteins AT3G43120 46.512 3.48e-22 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3279g00001 K14488 - gmx:100500218 196.823