Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3277g00040 ATGGACAACATTCAACCCGAATCCAAACCTGAACCCGAGCCCATCATACTCGGATCCTCCCAATCCGCTTCTGACGCTCCCAAATCCACCATCAAATTCCTCTGCAGCTACCGCGGTAAAATCCTCCCCCGCTACCCCGACGGCAAGCTCCGCTACCTCGGTGGCCAGACCCGTGTCCTCGCCGTCGATCGCACCATTCAATTTTCCGAACTGCTATCGAAGCTGGAAGAGCTGTGTGGCTCCTCCGTTAGGCACCTTCGATGCCAATTGCCCGCCGAAGACCTTGACGCTCTGGTTTCCATAACCTCCGACGAGGATCTCGCCAATCTCATCGAGGAATACGATCGCGTGATGTCGCCGCCGTTGAAGATCAGAGCCTTCCTTTCGCCGCCGAGATCTTTGAACAAACTTTCCGCACATCCGTCGATGTCTCTGTCAAAATCAGCCTCCTCCTCCTCTTCCTCCTCCGCGTCGTCGTCGTCTTCATCGTCGTGTCAAAGCCCTACCGGTGGCGGTTCTGGTTTCTGTTCTGGCCGGAGCTCTATCGCCGCGGCGGCGCCTGTGGTCGACCGCTGCGTCCATCAGATGTCGCCGATGACGGCGTATCCGGTCGGCGTGGAGAAATCTTCTGTGAGGAATATTCCTCTGCCACGCTACGGTTACCACGCTCAGGGGAACACTGGAAACGTTTATCTGATCCATAACGGCAACCACTGGCAATAG 723 0.5671 MDNIQPESKPEPEPIILGSSQSASDAPKSTIKFLCSYRGKILPRYPDGKLRYLGGQTRVLAVDRTIQFSELLSKLEELCGSSVRHLRCQLPAEDLDALVSITSDEDLANLIEEYDRVMSPPLKIRAFLSPPRSLNKLSAHPSMSLSKSASSSSSSSASSSSSSSCQSPTGGGSGFCSGRSSIAAAAPVVDRCVHQMSPMTAYPVGVEKSSVRNIPLPRYGYHAQGNTGNVYLIHNGNHWQ 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3277g00040 240 Gene3D - 49 129 - -
Gabi3277g00040 240 SMART PB1_new 45 129 IPR000270 GO:0005515
Gabi3277g00040 240 MobiDBLite consensus disorder prediction 1 27 - -
Gabi3277g00040 240 MobiDBLite consensus disorder prediction 138 170 - -
Gabi3277g00040 240 SUPERFAMILY CAD & PB1 domains 47 138 - -
Gabi3277g00040 240 Pfam PB1 domain 47 127 IPR000270 GO:0005515
Gabi3277g00040 240 CDD PB1_UP2 34 128 - -
Gabi3277g00040 240 PANTHER OS05G0427100 PROTEIN-RELATED 22 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3277g00040 Gabi-Chr3277 429881 434274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3277g00040 31 128 MAP Kinase Kinase Kinase AT5G57610 52.475 1.03e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3277g00040 - - gmx:100810685 267.7