Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3277g00036 ATGACGACCCGTTTCAAGAAGAACCGGAAGAAGCGCGGGCACGTGAGTGCGGGTCACGGTCGTATCGGGAAGCACCGGAAGCATCCCGGCGGTAGGGGAAACGCTGGAGTGGGCATGCGGTACTTTCACAAGCTTCGCAACAAGTTCCACTGCCCCATCGTCAACATCGACAAGCTCTGGTCTCTTGTTCTCGGGAAGGGTGTGTTGCCGGAAAACAAGCCACTCGTCGTCAAGGCCAAGCTCATTTCCAAGATCGCCGAGAAGAAGATTAAGGAGGCCGGTGGTGCTGTCCTTCTTACCGCTTAG 306 0.5654 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGVGMRYFHKLRNKFHCPIVNIDKLWSLVLGKGVLPENKPLVVKAKLISKIAEKKIKEAGGAVLLTA 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3277g00036 101 Gene3D - 64 101 - -
Gabi3277g00036 101 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 63 97 IPR021131 -
Gabi3277g00036 101 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 36 - -
Gabi3277g00036 101 MobiDBLite consensus disorder prediction 1 31 - -
Gabi3277g00036 101 Gene3D - 39 63 - -
Gabi3277g00036 101 SUPERFAMILY Ribosomal proteins L15p and L18e 6 100 IPR036227 -
Gabi3277g00036 101 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3277g00036 Gabi-Chr3277 371684 372372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3277g00036 1 101 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 65.068 3.18e-54 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3277g00036 K02900 - thj:104809056 163.696