Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3277g00025 ATGAAAATGACAGGGATCTTTCTTACGACCCTTTTCCTGTTCCACTTGGTCCTCATTCCTTCCAAGGCTTTCACATTCTCTAATCCTTTCCAAAATGCTTTCTTTGGACCTGATCAAGGCCGCGAGACTGGCCTACAAATGCCATTTAAAAATCCATTTGCAGGTACTGAACAACCTCCAGAAGAAAATCAGGGTGGAGGAGATGATCAACAAGAGAAGCCTGTTGGGAAGCAGCCTTTCTTTAATGCCAAACACAAACTCAAGCAAGGTTTCTACAGAGCTACTTGCCCAAATGCAGAGAAAATTGTAGCTGACGCGCTTGCCGAGATGGTTAAGACAAATCCAAGCGCAATCGCTAACTTCATTCGTCTTCAATTCCATGACTGCTTCGTTAATGGATGTGATGCCTCGGTTTTACTAGATTTTTCACCAGCTGGGGACAAAGTGGAGAAAAATTCAATGTTCAACGGTTTTCTCCTGAAAGGTGCTGATCTGATTGATGATATCAAGACAAAGCTTGAAGAAGAGTGTCCTGAAACTGTGTCATGTGCTGATACATTGGCATTTGCAACCAACGAGGCTATGGCGCTGGCGGGTGTGCCACGTCAGCGCCCTCTTGGTGGTCGTAGGGATGCATTGGTTTCACTTGCTTCCGTTGCAGAAGACAATAACCTTCCTTCGCCAAACTGGTCGGTGGATCAGATGATAGAGCTGTTCAACAGGAAAGGCTTCAACGCTGAAGAATTGGTGGTCCTACTCGGTGCACATTCTGTCGGTTCAGCTCACTGTGATCTTTTCATGGATAGGCTATACAATTTCAAGAACTCGCAGAAACCTGACCCGACTTTGATTCCACCTGTGGTTGATGAACTTAAACAGATATGCAAGAACCCTGGGACACCTCAGTTCAGAAACCCACCAGTGAACTTTGATGAGACACCTACTAAACTTGATAACCTATTTTACAAGAATATGGTGGAGAAAAAGAAATCGTTGCTCTTGAGTGATTCATTTTTGCTCGGTGATCCCAGGACTGGCCCTGTTGTGAGGAAGATGGCAGCTGAGCCTGGCTTGTTCCCAAAGAAGTTTGCTGAGGTCATGGTTAAGTTGTGTTCTTTGAATGTGCTCACTGGGAACGATGGGGAGATCAGGAAGACTTGTAGGTCCACTAATTAA 1176 0.4515 MKMTGIFLTTLFLFHLVLIPSKAFTFSNPFQNAFFGPDQGRETGLQMPFKNPFAGTEQPPEENQGGGDDQQEKPVGKQPFFNAKHKLKQGFYRATCPNAEKIVADALAEMVKTNPSAIANFIRLQFHDCFVNGCDASVLLDFSPAGDKVEKNSMFNGFLLKGADLIDDIKTKLEEECPETVSCADTLAFATNEAMALAGVPRQRPLGGRRDALVSLASVAEDNNLPSPNWSVDQMIELFNRKGFNAEELVVLLGAHSVGSAHCDLFMDRLYNFKNSQKPDPTLIPPVVDELKQICKNPGTPQFRNPPVNFDETPTKLDNLFYKNMVEKKKSLLLSDSFLLGDPRTGPVVRKMAAEPGLFPKKFAEVMVKLCSLNVLTGNDGEIRKTCRSTN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3277g00025 391 PRINTS Plant peroxidase signature 161 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Plant peroxidase signature 247 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Plant peroxidase signature 120 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Plant peroxidase signature 365 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Plant peroxidase signature 325 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Plant peroxidase signature 96 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Plant peroxidase signature 180 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Plant peroxidase signature 199 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Haem peroxidase superfamily signature 181 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Haem peroxidase superfamily signature 118 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Haem peroxidase superfamily signature 199 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 PRINTS Haem peroxidase superfamily signature 310 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 MobiDBLite consensus disorder prediction 45 76 - -
Gabi3277g00025 391 SUPERFAMILY Heme-dependent peroxidases 87 391 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 FunFam Peroxidase 90 240 - -
Gabi3277g00025 391 CDD secretory_peroxidase 86 390 IPR033905 GO:0004601|GO:0042744
Gabi3277g00025 391 ProSiteProfiles Plant heme peroxidase family profile. 86 391 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 FunFam Peroxidase 226 370 - -
Gabi3277g00025 391 PANTHER - 83 391 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 ProSitePatterns Peroxidases proximal heme-ligand signature. 248 258 IPR019793 -
Gabi3277g00025 391 Gene3D Peroxidase, domain 2 226 370 - -
Gabi3277g00025 391 Pfam Peroxidase 104 354 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3277g00025 391 Gene3D - 90 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3277g00025 Gabi-Chr3277 285242 286636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3277g00025 83 391 Peroxidase AT3G03670 41.801 1.09e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3277g00025 K00430 - gmx:100802856 462.996