Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3277g00014 ATGTCGACTTTGTTCCTTGCCAGCAACCTACCAGAGAAAGTGATTCAGATCGGATCAATCCCAAAAATGAAGAAAATAGTCCCTCTCATCTCTTTTCAATACCTCTTTTTCCTTCTCACCAAGTTTCTATCACTATCAGAAACTGTAATGGCAGAACCAAGGGCCAAGACAGTCCTAATAACATGTGGACAGCAACTAGAGCACAACACCTCTATCTTTGTTCCAAATTTTGTTGCAACTATGGAGAACATCAGTGAACAGATGCGCAGTACTGGCTTTGGCACAGCAGTTACAGGCACAGGACCTGATACCAACTATGGCCTGGCTCAGTGCTATGGAGATCTTTCATTACTTGACTGTGTGTTATGTTATGCTGAGGCACGCACGGTTCTTCCACAGTGCTTCCCTTATAATGCTGGTCGCATTTACTTAGATGGTTGCTTCATGAGAGCTGGGAACTATAGTTTCTTTAATGAGTATAAAGGACCAGAAGACAGAGCTTTATGTGGGAACTCAACTAAGAAGAACTCAAGCTTTCAAGCAGCAGCAAAGCATGCTGTTTTAAGAGCAGTTCAAGATGCACCCAACAACAAAGGCTATGCTAGAGGGAAGGTTGCTGTATCAGGAACTGCAAACGAGTCTGCTTATGTTCTGGCTGATTGTTGGAGGAGTTTGGACACAAGCTCTTGCAAAGCGTGTCTTGAGAATGCATCTTCTTCCATATTGGGGTGCTTGCCTTGGTCAGAAGGGCGAGCACTCAACACCGGGTGCTTCATGAGGTACTCAGACACAGATTTTCTTAACAAGGAACTGGGAAATGGGAGTTCAAGAGGTAATGTAGTAGTGATAGTTGTTGCAGTAGTCAGTTCGGTGATTGTTTCGGTGGTTGGAGTAGTTATTGGGGTTTATATATGGAAACAGAGATACATTCAAAAGAAACGAAGAGATTCAAATGATACAGAAAAGTTAGCAAAGACTCTTCAGCACAATAGCTTGAACTTCAAGTACTCTACATTGGAAAGGGCTACTGGATCTTTTCATGACAATAACAAGTTAGGACAAGGAGGATTTGGAACAGTTTACAAAGGAGTTCTAGCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAACAGACATAGAGCAGCAGATTTCTACAACGAAGTCAACATAATTAGTAGTGTGGAACACAAGAATCTGGTCAGACTGTTAGGATGCAGTTGTTCAGGACCTGAAAGCCTTCTTGTATATGAATTTCTGCCCAACAAAAGTCTTGATCGCTTCATTTTTGATAAAACAAAGGGCAAGGAACTGAACTGGGAAAAGAGATATGAAATTATCATCGGCACAGCTGAAGGATTAGTTTACCTGCACGAGAATTCCAAAATAAGGATAATTCACAGAGATATAAAAGCCAGCAACATCCTATTGGATGCAAAGCTTCGTGCAAAAATTGCAGATTTTGGTTTGGCCAGATCCTTTCAGGAAGACAAGAGCCACATAAGTACAGCTATTGCAGGAACTTTGGGGTATATGGCTCCGGAGTACCTAGCTCATGGCCAGTTAACAGAAAAAGCAGACATATATAGTTTTGGGGTGTTACTGCTAGAGATAGTTACTGGTAGACAGAACAACAGGAGCAAAGCATCAGAGTATTCAGACAGCTTAGTTACAGTGACATGGAAGCATTTTCAGTCAGGGGCTGCAGAACAATTATTTGATCCAAATCTAGAGTTGCAGGAGGACAACGATATCAATGTTAAGGATGAGATTTTAAGAGTGGTTCACATAGGACTTCTATGCACCCAAGAAGTCCCTTCATTACGACCAACCATGTCAAAGGCACTACAGATGCTAACAAAGAAAGAGGAGCATCTTGCAGCTCCATCTAATCCACCCTTCCTAGATGAGAGTACCATGGAACTCCATGACACAAACGGTGACCCATTTTACCCTCCGAATGCAGCTGATTCAATTGCTACTATGTCCTATAGCTCTTTTCATCCCAGATGA 2019 0.42 MSTLFLASNLPEKVIQIGSIPKMKKIVPLISFQYLFFLLTKFLSLSETVMAEPRAKTVLITCGQQLEHNTSIFVPNFVATMENISEQMRSTGFGTAVTGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNAGRIYLDGCFMRAGNYSFFNEYKGPEDRALCGNSTKKNSSFQAAAKHAVLRAVQDAPNNKGYARGKVAVSGTANESAYVLADCWRSLDTSSCKACLENASSSILGCLPWSEGRALNTGCFMRYSDTDFLNKELGNGSSRGNVVVIVVAVVSSVIVSVVGVVIGVYIWKQRYIQKKRRDSNDTEKLAKTLQHNSLNFKYSTLERATGSFHDNNKLGQGGFGTVYKGVLADGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDKTKGKELNWEKRYEIIIGTAEGLVYLHENSKIRIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADIYSFGVLLLEIVTGRQNNRSKASEYSDSLVTVTWKHFQSGAAEQLFDPNLELQEDNDINVKDEILRVVHIGLLCTQEVPSLRPTMSKALQMLTKKEEHLAAPSNPPFLDESTMELHDTNGDPFYPPNAADSIATMSYSSFHPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3277g00014 672 FunFam Cysteine-rich receptor-like protein kinase 2 55 156 - -
Gabi3277g00014 672 Pfam Protein kinase domain 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3277g00014 672 FunFam Cysteine-rich receptor-like protein kinase 3 165 266 - -
Gabi3277g00014 672 Gene3D - 55 156 IPR038408 -
Gabi3277g00014 672 Gene3D - 167 266 IPR038408 -
Gabi3277g00014 672 ProSiteProfiles Protein kinase domain profile. 346 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3277g00014 672 Gene3D Transferase(Phosphotransferase) domain 1 422 633 - -
Gabi3277g00014 672 SMART serkin_6 346 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3277g00014 672 FunFam Cysteine-rich receptor-like protein kinase 2 422 629 - -
Gabi3277g00014 672 FunFam Putative DUF26-domain receptor-like protein kinase family protein 314 421 - -
Gabi3277g00014 672 ProSiteProfiles Gnk2-homologous domain profile. 161 266 IPR002902 -
Gabi3277g00014 672 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 106 646 - -
Gabi3277g00014 672 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Gabi3277g00014 672 Pfam Salt stress response/antifungal 68 153 IPR002902 -
Gabi3277g00014 672 Pfam Salt stress response/antifungal 172 263 IPR002902 -
Gabi3277g00014 672 Gene3D Phosphorylase Kinase; domain 1 306 421 - -
Gabi3277g00014 672 ProSiteProfiles Gnk2-homologous domain profile. 55 156 IPR002902 -
Gabi3277g00014 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Gabi3277g00014 672 SUPERFAMILY Protein kinase-like (PK-like) 330 648 IPR011009 -
Gabi3277g00014 672 CDD STKc_IRAK 352 623 - -
Gabi3277g00014 672 MobiDBLite consensus disorder prediction 630 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3277g00014 Gabi-Chr3277 172182 175853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3277g00014 23 672 Receptor kinase-like Gene Family AT1G70520 67.580 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi3277g00014 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3277g00014 - - gmx:100804094 1131.32