Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3276g00002 ATGAATGAAAGTGTAGTATCTTTAGATGACATTATTGAATTGGAGAAAGAGAGTGATGAGTTAAGCGAAGATGGTCAATGTGAAATTATGAATCAAGACAAAGATAGTGATCGTATGCAAGACAATTGCCAAGAAATCATGGGAGATGATAGTGAGTTTAATGAGCCTCCTATATTGGGTAGAGTTTTTGAGACAGCTGAAGAAGCCTACGATTTTTATAATAATTTTGCAAAAGTTAAGGGGTTCGGAATACGTAAGCGTTACTTTAACAAGAGTAGAAGAACACAACAACCATGTTTGTGGAATTATGTGTGCTCAAAGCAAGTTGTCAAGAATCTACATGATAAAAGAATTGATTTGGCAGAAGATGGTACATTAAGAAGCGTCTTTTGGGCGGATGGTAGGTCGAGAGCTTCCTATGGTCAATTTGGGGAAGTCCTCGTCTTTGATGTGACTTACAAAAAAAACAAGTTCAAGTTTCCTTTTGCCCCTTTTGTTGGGGTTAATCACCATGGGCAATCAATTTTATTTGCTGCTGCATTGTTAGAGGATGAAACAGAGGCAACCTTTTACTTGCATATTTTGGAGCATAGTCAAGCATTACGTGCACAATTTAAAGATAGTTTTGATGTTGACTTTCATGCATGGTATAAAAGTCAAAGCATAGATGAATTTGAAGACAAATGGGAAACATTAAGAACTAAATATGATATTAAAGCAAGTAGTTGGTTGGCTAACATGTATGCTTCACGTAACCATTGGGCAAAAGCATACTTGAAAGATACTTTTTTTGCTGGAATGACTACAAGTGGCCGAAGTGAGAGCATCAATGCATTTTTTGATGGATATGTCAACTCCAACACAATGTTAAATGACTTTGTTACCCAATATGATAAAGCAATCAAGTCTAGAAGAGATGCAGAAGAAGATGAAGATTTTAAAACTAGAAATACAAAAGCAAATTTGGAGAGTAATCATCCAATTGAAGGAATAGCTGGAGAGCGCTACACAAGAAAAATGTTTGAAATTTTTAAAAAAGAGTGGAGGGCTGCCACACAAGATTACTTTCACGAAAAGATGTCAACAGACGAGCATAATATTAGGTACCGTGTGGGATCTCCCAAAGTTAATAAAGAGTTATGGGCAATTGTTGATTACAATTTGATAGAAAGTTCCACTACTCATTGTTCTTGTGCAAAGTTTGAGACTATGGGGATTTTATGCAAACATATTTTGTACATCTTCAAGAAGAAACAAATGATGACCCTTCCTGAAAAGTATATTTTAACTAGATGGACCATGAATGCAAGCTATAAGGCTGAAAATCTTTTGTCTGTTCATTCCGAAACAACTACCAGTGAAGTAAGTGAATTGTCTTTGTTGTCAACTCAGTCGAAGTGCAATTTGGCTATTTCTGAAGAAAAAGATTGTTTTCATGAAATTAGAAGATTTGATACTATTGTTGATGAGTTTATTCAACAACAATTAGAAAGAAAGAGAAAAAGAATTGATGAGGAAACCACAAGCTCAATTGTACCTTCACAAAGTTGTTTCATTCCTTCTCAAGATTCACTTAATTATGTTCGAGATCCCACTCAAGCAGTCAAAATTAAGGGGCGTCCAAAAGTTGCTTCAGGTATAAAATCAAGCATTGAGTTAGCAGCCAAACAACAAAAGACTTGCAGTTATTGTCGAGAGAAGTGTCATAATAAGACCAGTTGTAAGAAGCAAATGATGGATGTTGCAAGAGAGAAGCAAAAGGAATAA 1767 0.3543 MNESVVSLDDIIELEKESDELSEDGQCEIMNQDKDSDRMQDNCQEIMGDDSEFNEPPILGRVFETAEEAYDFYNNFAKVKGFGIRKRYFNKSRRTQQPCLWNYVCSKQVVKNLHDKRIDLAEDGTLRSVFWADGRSRASYGQFGEVLVFDVTYKKNKFKFPFAPFVGVNHHGQSILFAAALLEDETEATFYLHILEHSQALRAQFKDSFDVDFHAWYKSQSIDEFEDKWETLRTKYDIKASSWLANMYASRNHWAKAYLKDTFFAGMTTSGRSESINAFFDGYVNSNTMLNDFVTQYDKAIKSRRDAEEDEDFKTRNTKANLESNHPIEGIAGERYTRKMFEIFKKEWRAATQDYFHEKMSTDEHNIRYRVGSPKVNKELWAIVDYNLIESSTTHCSCAKFETMGILCKHILYIFKKKQMMTLPEKYILTRWTMNASYKAENLLSVHSETTTSEVSELSLLSTQSKCNLAISEEKDCFHEIRRFDTIVDEFIQQQLERKRKRIDEETTSSIVPSQSCFIPSQDSLNYVRDPTQAVKIKGRPKVASGIKSSIELAAKQQKTCSYCREKCHNKTSCKKQMMDVAREKQKE 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3276g00002 588 ProSiteProfiles Zinc finger SWIM-type profile. 386 419 IPR007527 GO:0008270
Gabi3276g00002 588 Pfam MULE transposase domain 146 196 IPR018289 -
Gabi3276g00002 588 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 459 IPR031052 GO:0006355
Gabi3276g00002 588 Pfam SWIM zinc finger 393 412 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3276g00002 Gabi-Chr3276 38794 41189 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3276g00002 MULE 9.6e-11 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3276g00002 - - lsv:128127215 447.973