Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3269g00044 ATGGCCTCAAGCTCACTCAGCAAACAAAAGCCTTCTGATTCTTCTTGGACTCCAAAACAGAACAAGCTGTTTGAAAAGGCACTTGCAAAATATGACAAGGATACCCCTGATCGGTGGCAGAATATAGCCAAAGCAGTTGGTGGTAAATCGGCCGAGGAAGTTAAGAGACACTATGAGATACTCTTGGAGGATCTCAAACACATAGAGTCTGGCCATGTTCCCATTCCCAACTACAAATCAAATGGAAGTAGCTAG 255 0.4392 MASSSLSKQKPSDSSWTPKQNKLFEKALAKYDKDTPDRWQNIAKAVGGKSAEEVKRHYEILLEDLKHIESGHVPIPNYKSNGSS 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3269g00044 84 FunFam Transcription factor SRM1 8 75 - -
Gabi3269g00044 84 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3269g00044 84 CDD SANT 15 62 IPR001005 -
Gabi3269g00044 84 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Gabi3269g00044 84 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Gabi3269g00044 84 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Gabi3269g00044 84 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Gabi3269g00044 84 Gene3D - 7 75 - -
Gabi3269g00044 84 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Gabi3269g00044 84 SMART sant 12 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3269g00044 Gabi-Chr3269 356912 360439 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi3269g00044 Myb_DNA-binding 2.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3269g00044 - - gmx:100785292 158.303