Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3269g00035 ATGAGGATGGATCGGGGAAGCATAGTGTGGTTTGGGTTCTTGTTCTTGTTGATGTTTGAGTTCACAATGGAGCAGATTGAGCCACTGAGTTCCGACATTGAGCGAGCAGCACTCCTCGAATTAAGGCATTCTCTGGGGTTGAGGAGCAAGGAATGGCCAATAAAGCCAGACCCTTGTTTAATGTGGATTGGTATAACCTGCCAGAATGGTCGAGTTGTTGATATCAATATCTCTGGCTTTATAAGAACAAGACTGGGGAGGAGAAACCCACAATTTGCCGTGGATGCCTTGTCCAATTTCACTCTCTTGCAGTCCTTCAATGCCTCCAATTTCCTCCTTCCTGGTCCTATTCCTGATTGGTTTGGTCTCAAACTCCCTTCACTCCTTGTGCTTGATCTTCGTTCTTGCTCCATCATTGATGCTATTCCTTCCACTCTTGGCAATTTAACCAACCTCACTAGTCTCTATCTTTCTGATAACCATCTTACTGGGACAGTTCCTCATAGTCTTGGTCAACTCTTTGCCCTTTCGGTTCTTGATCTTTCCCGGAATTCTCTAACTGGGTTCTTACCTGCGTCCTTTGCCTTTCTTGAAAATCTTTATTCCCTTGACATGTCTGCAAATTTGTTGTCCGGGCCGATTCCCCCGGGTATAGGATCCCTTTTAAGGCTACAGTACTTGAATCTTTCCAACAATGGCCTAACTTCTTTACCTGCACAATTGGGAAGTCTTACTAGCCTACTTGACCTTGATCTTAGTGCAAATTCTTTCTCTGGTGGAGTGCCTCCGGATTTCAAAGGGTTGAGTAACTTGCGGACAATGATACTTGCAAACAATATGCTCAATGGACCCCTGCCGGGGAACTTGTTTACTGCTTCAACGCAGTTGCAGCTTGTAGTGCTGAGACAAAACAATTTTACAGGTTCTTTGCCTGTTGAGTTGTGGTCTCTGCCAAGATTGACCTCCCTCGATGTGTCTGCCAATAACTTCAGTGGTCTGCTTCCCAATTCTAGTTCCACTGCTAATACTACTGTTGCCGTGCTCGATATTTCTAATAATATGTTTTATGGAAACCTCACTCCGGTGCTCAGAAGGTTCGTTCGCATCAATCTTTCAAAGAATTATTTTGAGGGCAAGGTTCTGGATTTCATGCTTGATGTATCTCTAGAGATCAACTGCCTTCAAAGCGTGGCAAATCAAAGGACAACAACGGACTGTGCAGCATTTTATGCAGATAAGGGCCTCAATTTTGATAATTTTGGAAGCCCAAATTCTACAGAACCTCCTACCTCTGGGAAGAGCAGTAAAACTAAGGGCATATTGGCAGGAGTCTTGGGTGGACTGGGTTTATTTGCACTTTTAGTGTTGCTTCTGTGCATTCGTAAGAGGGGTAATTCAAATCAAAGGCGAAATGGTGTGGGCCCTGCTCCTGCTGGAGGGAGTCCTCCACATCCCACTGTATCAATCAACTATCCAAAAGTTGGAGACTCATTTACATATCATCAGTTGCTCCAGGCCACAGGAGATTTCAATGATGCAAATCTTATCAAACATGGCCACACTGGGGATTTCTTCAATGGAGTTTTGGAAAGTGGGATTCCTGTCGTCGTCAAAAGGATTGACATGCGATCAACTAAAAAGGATGCTTACCTATCGGAATTAGACTTCTTCAATAAGGTTTCTCATCAAAGATTTGTTCCCTTTTTAGGTCATTGCTCAGAAAATGAGAATGAGAAGTTCCTGGTATATAAATATCTGCCAAACGGGGACTTGTCTAATTGCTTATACTACAAAAACACTACATCTGAAGATGGTAGTTTGCAGTCACTGGACTGGATAACTAGGTTAAAAGTTGCTACTGGAGCAGCAGAGGCCCTATCGTATTTGCATCATGAATGTGTTCCACCCATTGTTCACAGAGATATTCAAGCGAGCAGTATACTTCTAGATGATAAATATGAAGCACGGTTAGGGAGTGTAAGTGAAACCTGTGTTCAAGAAGGCGATACTCATCAAAGTAAAATCACCCGGTTTCTGCGGTTGCCTCAGTCCTCTGAACAAGGCACATCTGGTTCATCAACATCAGCTTGTGCCTATGACATTTATTGCTTTGGGAAAGTGTTACTTGAGCTGGTGACTGGTAAGCTGGGAATTAGTGCATCCAGTGATGGTGAAATAAAAGAATGGTTCGATCAGATTCTACCTTGCATTAGTATGTGTGACAAGGAGCTCGTGACAAAAATTGTTGATCCGTCTCTGGTTGTTGATGAGGATTTCTTAGAGGAAGTGTGGGCTATAGCCATTGTTGCCAGGTCTTGCCTAAATCCCAAACCTTCAAGAAGACCCCCAATGAGATACGTTCTCAAGGCTTTGGAAAATCCTGCAAAAGTTGTGAGGGAAGAAAATTCCGGCTCTGCACGGCTTAAAGCAAGCTCTTCCAGAGGCTCTTGGAATGCTGCTGCTTTTGGTAGTTGGCGTCAGAGTTCATCCGATGTAACAGTAATTCCAATAGCCTCTAGCACAATGCTAGAAGGAACTAGTAGCTCAAAGCTTTCAGGAACTACCAGCTCACGATCACAGGGTAGCATCCACAATGGTGGGTGTGATAGTTCATCACCTCGGAGACGTCAGCCAAAAGAGACATTGCCAGAGCCATCTGGCTTACATGATGTAGAGGGGCGGAAGCAGGAATAG 2694 0.441 MRMDRGSIVWFGFLFLLMFEFTMEQIEPLSSDIERAALLELRHSLGLRSKEWPIKPDPCLMWIGITCQNGRVVDINISGFIRTRLGRRNPQFAVDALSNFTLLQSFNASNFLLPGPIPDWFGLKLPSLLVLDLRSCSIIDAIPSTLGNLTNLTSLYLSDNHLTGTVPHSLGQLFALSVLDLSRNSLTGFLPASFAFLENLYSLDMSANLLSGPIPPGIGSLLRLQYLNLSNNGLTSLPAQLGSLTSLLDLDLSANSFSGGVPPDFKGLSNLRTMILANNMLNGPLPGNLFTASTQLQLVVLRQNNFTGSLPVELWSLPRLTSLDVSANNFSGLLPNSSSTANTTVAVLDISNNMFYGNLTPVLRRFVRINLSKNYFEGKVLDFMLDVSLEINCLQSVANQRTTTDCAAFYADKGLNFDNFGSPNSTEPPTSGKSSKTKGILAGVLGGLGLFALLVLLLCIRKRGNSNQRRNGVGPAPAGGSPPHPTVSINYPKVGDSFTYHQLLQATGDFNDANLIKHGHTGDFFNGVLESGIPVVVKRIDMRSTKKDAYLSELDFFNKVSHQRFVPFLGHCSENENEKFLVYKYLPNGDLSNCLYYKNTTSEDGSLQSLDWITRLKVATGAAEALSYLHHECVPPIVHRDIQASSILLDDKYEARLGSVSETCVQEGDTHQSKITRFLRLPQSSEQGTSGSSTSACAYDIYCFGKVLLELVTGKLGISASSDGEIKEWFDQILPCISMCDKELVTKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPAKVVREENSGSARLKASSSRGSWNAAAFGSWRQSSSDVTVIPIASSTMLEGTSSSKLSGTTSSRSQGSIHNGGCDSSSPRRRQPKETLPEPSGLHDVEGRKQE 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3269g00035 897 ProSiteProfiles Leucine-rich repeat profile. 223 245 IPR001611 GO:0005515
Gabi3269g00035 897 Pfam Leucine rich repeat 223 281 IPR001611 GO:0005515
Gabi3269g00035 897 Pfam Leucine rich repeat 150 210 IPR001611 GO:0005515
Gabi3269g00035 897 Gene3D Ribonuclease Inhibitor 193 290 IPR032675 -
Gabi3269g00035 897 FunFam Putative LRR receptor-like serine/threonine-protein kinase 586 811 - -
Gabi3269g00035 897 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 31 190 - -
Gabi3269g00035 897 Gene3D Phosphorylase Kinase; domain 1 485 585 - -
Gabi3269g00035 897 SUPERFAMILY Protein kinase-like (PK-like) 486 791 IPR011009 -
Gabi3269g00035 897 FunFam Leucine-rich repeat receptor protein kinase EMS1 191 288 - -
Gabi3269g00035 897 Pfam Protein tyrosine and serine/threonine kinase 516 788 IPR001245 GO:0004672|GO:0006468
Gabi3269g00035 897 MobiDBLite consensus disorder prediction 873 897 - -
Gabi3269g00035 897 MobiDBLite consensus disorder prediction 844 897 - -
Gabi3269g00035 897 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 292 422 - -
Gabi3269g00035 897 Gene3D Ribonuclease Inhibitor 291 387 IPR032675 -
Gabi3269g00035 897 SUPERFAMILY L domain-like 92 387 - -
Gabi3269g00035 897 MobiDBLite consensus disorder prediction 844 872 - -
Gabi3269g00035 897 Gene3D Ribonuclease Inhibitor 31 192 IPR032675 -
Gabi3269g00035 897 MobiDBLite consensus disorder prediction 468 487 - -
Gabi3269g00035 897 Gene3D Transferase(Phosphotransferase) domain 1 586 812 - -
Gabi3269g00035 897 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 397 814 - -
Gabi3269g00035 897 FunFam Predicted protein 480 585 - -
Gabi3269g00035 897 SMART LRR_typ_2 268 292 IPR003591 -
Gabi3269g00035 897 SMART LRR_typ_2 221 244 IPR003591 -
Gabi3269g00035 897 SMART LRR_typ_2 173 196 IPR003591 -
Gabi3269g00035 897 SMART LRR_typ_2 317 340 IPR003591 -
Gabi3269g00035 897 SMART LRR_typ_2 125 148 IPR003591 -
Gabi3269g00035 897 SMART LRR_typ_2 149 172 IPR003591 -
Gabi3269g00035 897 ProSiteProfiles Protein kinase domain profile. 510 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3269g00035 Gabi-Chr3269 293883 299456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3269g00035 34 683 Miscellaneous Gene Families AT2G16250 55.489 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Gabi3269g00035 PK_Tyr_Ser-Thr 7.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3269g00035 - - gmx:100776587 1357.43