Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3269g00034 ATGGCAGCGTCCGCCAACCCCTCCGGCGGTGCTCTGCCGGAGCTAACTAAGAGAACCCCCATTCTGGGTCTCAAACTCTACGTCTTAATCTCCGTTTTCCTACTAATCCTGGTCGCAGTCGTGCTCCTCATCTTGCTCTGCATTCGCCGGAGCCGAAGCTCCAAGAAGCGCAAAATGCGAGTGAAGCACAGCTCGGGCACAATCCCACTAGTGTCGAAGGAGATCGTGGAGGTTAAGGCATTGGAGCTCAAAATCGAAGACGGTGATGTTGATCCGAAGTCAGAGATCGAAGAGAGTGCGTCGGTGGAGTGTCCGAACATAGGGTGGGGCCGGTGGTATAGCCTGAAGGAGCTAGAGATTGCAACTGATGGGTTTGCTGAAGGGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTACAGAGGAATTCTCCAAGACGGTTCTGTCGTGGCTGTGAAGAATCTTCTCAACAACAAGGGTCAAGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTGAGGCATAAGAATTTGGTGGGGTTAGTTGGATATTGTGCAGAAGGTGCTCAAAGGATGCTTGTTTATGAGTACGTTGACAATGGAAATTTGGAGCAGTGGCTGCATGGTGATGTAGGGCCTGTTAGCCCCTTGACATGGGATATACGAATGAGGATTGCTGTTGCGACTGCAAAAGGGCTAGCCTACTTGCATGAAGGCTTAGAACCCAAAGTTGTCCATCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAAGTGGAATGCCAAAGTATCTGACTTTGGACTGGCCAAGCTCTTAGGGTCTGAGAAAAGCTATGTGACAACGCGAGTAATGGGGACATTTGGATATGTTTCACCTGAGTATGCAAGCACGGGTATGCTTAATGAGGGCAGTGATGTGTATAGTTTTGGGATTCTACTTATGGAGCTAATTACAGGAAGAAGTCCCATTGATTATTCTAGACCACCTGGAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTAGCAAGTCGTCGTGGTGATGGGCTAGTTGATCCTTTAATTGAGATTCAGCCCTCTCCAAGATCTTTGAAGCGAGCTTTACTGGTTTGTCTGCGCTGTATAGATTTGGATGTTATTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTCGAGGCAGATGATTTTCCCTTTCGTACTGAACTTCGAACAACTAGAGAGAAAGATAATGTTCCTTCTCAAGCAGCTGTTTCAAGCAAGGTTCCATATCCAACAAGGCATGTGGAGCCGGTAGATAAATCAAGCTGGAGATGA 1329 0.4695 MAASANPSGGALPELTKRTPILGLKLYVLISVFLLILVAVVLLILLCIRRSRSSKKRKMRVKHSSGTIPLVSKEIVEVKALELKIEDGDVDPKSEIEESASVECPNIGWGRWYSLKELEIATDGFAEGNVIGEGGYGIVYRGILQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGAQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMRIAVATAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPGEMNLVDWFKGMVASRRGDGLVDPLIEIQPSPRSLKRALLVCLRCIDLDVIKRPKMGQIVHMLEADDFPFRTELRTTREKDNVPSQAAVSSKVPYPTRHVEPVDKSSWR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3269g00034 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Gabi3269g00034 442 SMART serkin_6 125 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3269g00034 442 ProSiteProfiles Protein kinase domain profile. 125 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3269g00034 442 FunFam Putative receptor-like serine/threonine-protein kinase 201 411 - -
Gabi3269g00034 442 SUPERFAMILY Protein kinase-like (PK-like) 106 397 IPR011009 -
Gabi3269g00034 442 PANTHER OS01G0323000 PROTEIN 98 418 - -
Gabi3269g00034 442 MobiDBLite consensus disorder prediction 411 442 - -
Gabi3269g00034 442 FunFam Probable serine/threonine-protein kinase At1g01540 105 200 - -
Gabi3269g00034 442 Pfam Protein kinase domain 127 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3269g00034 442 Gene3D Transferase(Phosphotransferase) domain 1 201 411 - -
Gabi3269g00034 442 CDD STKc_IRAK 131 397 - -
Gabi3269g00034 442 ProSitePatterns Protein kinases ATP-binding region signature. 131 153 IPR017441 GO:0005524
Gabi3269g00034 442 Gene3D Phosphorylase Kinase; domain 1 109 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3269g00034 Gabi-Chr3269 282704 286201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3269g00034 17 397 Receptor kinase-like Gene Family AT4G02010 41.299 2.99e-92 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gabi3269g00034 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3269g00034 - - gmx:100779420 717.998