Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3268g00001 ATGGATCTTCAAACCCTATACTTTACATCCATTTTCTCCCTATTCATTTTTATGCTTATGGCACACAAAATAGTGACCAAGAAATCTGAGTCAACTCCAAATTTACCACCAGGGCCATGGAAGCTACCTATCATAGGGAACATACACAACCTTGTTAGCTCACTTCCCCATCGTAGGCTAAGAGATTTATCAGCAAAATATGGACCCTTAATGCATCTGAAGCTTGGTGAGGTTTCTACCATTGTGGTCTCATCCCCAGAGTATGCTAGGGAAGTGTTGAAAACCCATGATCTTAACTTTGCATCAAGGCCTCCTATCCTAGCTTCAAAGATACTTAGTTATGATTCTCAGAACATAGCTTTTTCACCTTATGGTGATTATTGGAGACAACTAAGGAAGATTTGTGCATTGGAGCTATTAAGCTCAAAACGTGTCCAATCTTTCCAACCAGTGAGAGGGGAAGAGCTCACTAAACTCATCAAATGGATTGCATCAAAAGAAGGATCACTCATTAATCTCACCAAAGAAGTGACTTCAACAATATCTACAATCGTTTCAAGGACAGCCCTTGGGAAGAAGTTCAGGGATCATCAACAATTCCCATCACTGATAAGGGAAGCCATGGAGGTTGCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGCTAAATGGCTTCAACACATCTCTGGGTTGAAGCCTAAGCTAGAAAAGTTGCACCAACAAACTGATAGGATAGTGCAAAACATCATCAATGACCAAAGAGAGGCTAAGTTAAAGGGCCCAAAAGGCCAGGGTGAAGAAGCAGAAGAATATCTTGTAGACGTGCTCTTGAAGCAGGAGTTTTGCTTAAGTGATGAAAGCGTCAAGGCTGTGATCATGGATATATTTGGAGCTGGGAGTGACTCATCATCTACCACAATAACATGGGCAATGGCAGAGATGATTAAAAATCCAAGAGTAACGAAGAAGGTACAAGCTGAGGTAAGAGAGGTGTTTGATAAAGAAGGAAAGCCTGATGAAAGTGACATGGATAAACTAAAATATTTGAAATCAGTTGTGAAAGAAACATTAAGATTACACCCTCCTGGTGCTATTTTGCTTCCAAGAGAATGTGGACAAGCTTGTGAGATCAAAGGGTATCATATACCCGTGAAAAGCAAGGTCCTAGTCAATGCTTGGGCAATTGGAAGAGATCCAGATTATTGGAATGAGCCTGAGAGATTTTATCCTGAGAGGTTCATTGATAGTTCTGTTGACTACAGAGGTAATAATTTTGAATACATCCCATTTGGTGCTGGAAGAAGAACATGCCCAGGCGTCACGTTTGGCTTGATCAACGTTGAGTTTCCACTAGCATTATTGATGTATCATTTTGATTGGAAACTTCCCAATGGAATGAAAAATGAAGATTTAGACATGACTGAGACTTATGGAATTGGAGTTAGTCGAAAATATGATTTACGCCTGATTCCGATTACTTCTCATGCCTGA 1494 0.405 MDLQTLYFTSIFSLFIFMLMAHKIVTKKSESTPNLPPGPWKLPIIGNIHNLVSSLPHRRLRDLSAKYGPLMHLKLGEVSTIVVSSPEYAREVLKTHDLNFASRPPILASKILSYDSQNIAFSPYGDYWRQLRKICALELLSSKRVQSFQPVRGEELTKLIKWIASKEGSLINLTKEVTSTISTIVSRTALGKKFRDHQQFPSLIREAMEVAGGFDLGDLYPSAKWLQHISGLKPKLEKLHQQTDRIVQNIINDQREAKLKGPKGQGEEAEEYLVDVLLKQEFCLSDESVKAVIMDIFGAGSDSSSTTITWAMAEMIKNPRVTKKVQAEVREVFDKEGKPDESDMDKLKYLKSVVKETLRLHPPGAILLPRECGQACEIKGYHIPVKSKVLVNAWAIGRDPDYWNEPERFYPERFIDSSVDYRGNNFEYIPFGAGRRTCPGVTFGLINVEFPLALLMYHFDWKLPNGMKNEDLDMTETYGIGVSRKYDLRLIPITSHA 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3268g00001 497 SUPERFAMILY Cytochrome P450 36 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PANTHER OS08G0105600 PROTEIN 59 494 - -
Gabi3268g00001 497 CDD CYP71-like 66 488 - -
Gabi3268g00001 497 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 Pfam Cytochrome P450 36 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 Gene3D Cytochrome P450 28 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3268g00001 497 FunFam Cytochrome P450 71D8 28 492 - -
Gabi3268g00001 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3268g00001 Gabi-Chr3268 31661 33975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3268g00001 14 492 Cytochrome P450 AT3G26300 43.927 1.64e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3268g00001 - K13267 gmx:100813216 798.119